Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
P20040 AC116797.2-201ENSMUST00000224763 4221 ntBASIC4.83□□□□□ -1.64
P20040 Gm37485-201ENSMUST00000192326 2953 ntBASIC4.83□□□□□ -1.64
P20040 AC105407.2-201ENSMUST00000223707 3911 ntBASIC4.83□□□□□ -1.64
P20040 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC4.83□□□□□ -1.64
P20040 Gm38387-201ENSMUST00000191945 2577 ntBASIC4.83□□□□□ -1.64
P20040 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
P20040 Gm28322-201ENSMUST00000185627 1475 ntBASIC4.83□□□□□ -1.64
P20040 Gm42662-201ENSMUST00000202539 1431 ntBASIC4.83□□□□□ -1.64
P20040 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
P20040 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
P20040 Gm26078-201ENSMUST00000104067 128 ntBASIC4.83□□□□□ -1.64
P20040 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
P20040 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
P20040 Gm11908-201ENSMUST00000117755 347 ntBASIC4.83□□□□□ -1.64
P20040 Mup-ps28-201ENSMUST00000120686 289 ntBASIC4.83□□□□□ -1.64
P20040 Gm24395-201ENSMUST00000158139 125 ntBASIC4.83□□□□□ -1.64
P20040 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC4.83□□□□□ -1.64
P20040 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC4.83□□□□□ -1.64
P20040 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
P20040 Gm9294-201ENSMUST00000165198 789 ntBASIC4.83□□□□□ -1.64
P20040 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
P20040 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC4.83□□□□□ -1.64
P20040 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC4.83□□□□□ -1.64
P20040 Gm8993-201ENSMUST00000182182 983 ntBASIC4.83□□□□□ -1.64
P20040 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
P20040 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC4.83□□□□□ -1.64
P20040 Gm7990-201ENSMUST00000212126 593 ntBASIC4.83□□□□□ -1.64
P20040 Gm45789-201ENSMUST00000213038 364 ntBASIC4.83□□□□□ -1.64
P20040 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC4.83□□□□□ -1.64
P20040 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC4.83□□□□□ -1.64
P20040 AC158633.1-201ENSMUST00000219892 649 ntBASIC4.83□□□□□ -1.64
P20040 Gm8613-201ENSMUST00000220383 1077 ntBASIC4.83□□□□□ -1.64
P20040 Gm5087-204ENSMUST00000225820 645 ntBASIC4.83□□□□□ -1.64
P20040 AC154323.1-201ENSMUST00000228329 1231 ntBASIC4.83□□□□□ -1.64
P20040 AC166574.7-201ENSMUST00000228502 704 ntBASIC4.83□□□□□ -1.64
P20040 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
P20040 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
P20040 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC4.83□□□□□ -1.64
P20040 Gm25099-201ENSMUST00000093716 116 ntBASIC4.83□□□□□ -1.64
P20040 Gm19136-201ENSMUST00000190706 2067 ntBASIC4.83□□□□□ -1.64
P20040 Gm6645-201ENSMUST00000118505 2726 ntBASIC4.83□□□□□ -1.64
P20040 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
P20040 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
P20040 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC4.83□□□□□ -1.64
P20040 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
P20040 AC122769.3-201ENSMUST00000227739 3245 ntBASIC4.83□□□□□ -1.64
P20040 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
P20040 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
P20040 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
P20040 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
P20040 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
P20040 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC4.82□□□□□ -1.64
P20040 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC4.82□□□□□ -1.64
P20040 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
P20040 Gm42540-201ENSMUST00000200319 2008 ntBASIC4.82□□□□□ -1.64
P20040 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
P20040 AC159308.1-201ENSMUST00000216615 1351 ntBASIC4.82□□□□□ -1.64
P20040 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
P20040 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
P20040 Gm43745-201ENSMUST00000198085 1883 ntBASIC4.82□□□□□ -1.64
P20040 Gm4973-201ENSMUST00000206925 1334 ntBASIC4.82□□□□□ -1.64
P20040 Gm7680-201ENSMUST00000216198 1348 ntBASIC4.82□□□□□ -1.64
P20040 Gm24886-201ENSMUST00000104384 123 ntBASIC4.82□□□□□ -1.64
P20040 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
P20040 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
P20040 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC4.82□□□□□ -1.64
P20040 Gm5381-201ENSMUST00000117975 1250 ntBASIC4.82□□□□□ -1.64
P20040 Gm11737-201ENSMUST00000118713 468 ntBASIC4.82□□□□□ -1.64
P20040 Gm6427-201ENSMUST00000118721 979 ntBASIC4.82□□□□□ -1.64
P20040 Gm12936-201ENSMUST00000121439 301 ntBASIC4.82□□□□□ -1.64
P20040 Gm7309-201ENSMUST00000121670 581 ntBASIC4.82□□□□□ -1.64
P20040 Gm24382-201ENSMUST00000122698 107 ntBASIC4.82□□□□□ -1.64
P20040 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
P20040 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
P20040 Gm25363-201ENSMUST00000158850 245 ntBASIC4.82□□□□□ -1.64
P20040 Gm6808-201ENSMUST00000162341 807 ntBASIC4.82□□□□□ -1.64
P20040 Gm6872-201ENSMUST00000165001 700 ntBASIC4.82□□□□□ -1.64
P20040 Gm27030-201ENSMUST00000182551 464 ntBASIC4.82□□□□□ -1.64
P20040 Gm27887-201ENSMUST00000184367 102 ntBASIC4.82□□□□□ -1.64
P20040 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC4.82□□□□□ -1.64
P20040 Gm38015-201ENSMUST00000193048 188 ntBASIC4.82□□□□□ -1.64
P20040 Gm9480-201ENSMUST00000198038 616 ntBASIC4.82□□□□□ -1.64
P20040 Gm7733-201ENSMUST00000199038 919 ntBASIC4.82□□□□□ -1.64
P20040 Gm44431-201ENSMUST00000203500 413 ntBASIC4.82□□□□□ -1.64
P20040 AC134333.1-201ENSMUST00000204536 944 ntBASIC4.82□□□□□ -1.64
P20040 Gm45845-201ENSMUST00000207326 582 ntBASIC4.82□□□□□ -1.64
P20040 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC4.82□□□□□ -1.64
P20040 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC4.82□□□□□ -1.64
P20040 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC4.82□□□□□ -1.64
P20040 Gm6477-201ENSMUST00000217098 764 ntBASIC4.82□□□□□ -1.64
P20040 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC4.82□□□□□ -1.64
P20040 AC156802.1-201ENSMUST00000223623 579 ntBASIC4.82□□□□□ -1.64
P20040 AC166574.3-201ENSMUST00000226725 367 ntBASIC4.82□□□□□ -1.64
P20040 AC124408.2-201ENSMUST00000228168 645 ntBASIC4.82□□□□□ -1.64
P20040 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
P20040 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
P20040 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
P20040 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
P20040 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms