Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC5.72□□□□□ -1.49
TnfP06804 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.72□□□□□ -1.49
TnfP06804 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC5.72□□□□□ -1.49
TnfP06804 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC5.72□□□□□ -1.49
TnfP06804 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC5.72□□□□□ -1.49
TnfP06804 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TnfP06804 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.72□□□□□ -1.49
TnfP06804 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.72□□□□□ -1.49
TnfP06804 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.72□□□□□ -1.49
TnfP06804 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC5.72□□□□□ -1.49
TnfP06804 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.72□□□□□ -1.49
TnfP06804 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC5.72□□□□□ -1.49
TnfP06804 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC5.72□□□□□ -1.49
TnfP06804 Gm17981-201ENSMUST00000191109 739 ntBASIC5.72□□□□□ -1.49
TnfP06804 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC5.72□□□□□ -1.49
TnfP06804 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC5.72□□□□□ -1.49
TnfP06804 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC5.72□□□□□ -1.49
TnfP06804 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC5.72□□□□□ -1.49
TnfP06804 Gm9685-201ENSMUST00000211275 538 ntBASIC5.72□□□□□ -1.49
TnfP06804 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TnfP06804 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.72□□□□□ -1.49
TnfP06804 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
TnfP06804 Gm19186-201ENSMUST00000219922 333 ntBASIC5.72□□□□□ -1.49
TnfP06804 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC5.72□□□□□ -1.49
TnfP06804 Zfp429-203ENSMUST00000224684 524 ntBASIC5.72□□□□□ -1.49
TnfP06804 AC154323.1-201ENSMUST00000228329 1231 ntBASIC5.72□□□□□ -1.49
TnfP06804 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TnfP06804 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TnfP06804 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TnfP06804 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TnfP06804 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
TnfP06804 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TnfP06804 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
TnfP06804 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.72□□□□□ -1.49
TnfP06804 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.72□□□□□ -1.49
TnfP06804 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.72□□□□□ -1.49
TnfP06804 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TnfP06804 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TnfP06804 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TnfP06804 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TnfP06804 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
TnfP06804 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.71□□□□□ -1.49
TnfP06804 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
TnfP06804 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.71□□□□□ -1.49
TnfP06804 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.71□□□□□ -1.5
TnfP06804 Gm37079-201ENSMUST00000194114 2135 ntBASIC5.71□□□□□ -1.5
TnfP06804 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TnfP06804 Gm9314-201ENSMUST00000199881 1528 ntBASIC5.71□□□□□ -1.5
TnfP06804 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TnfP06804 Mir1903-201ENSMUST00000122574 80 ntBASIC5.71□□□□□ -1.5
TnfP06804 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.71□□□□□ -1.5
TnfP06804 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.71□□□□□ -1.5
TnfP06804 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC5.71□□□□□ -1.5
TnfP06804 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.71□□□□□ -1.5
TnfP06804 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC5.71□□□□□ -1.5
TnfP06804 Gm19029-201ENSMUST00000189923 564 ntBASIC5.71□□□□□ -1.5
TnfP06804 Gm18717-201ENSMUST00000192744 1241 ntBASIC5.71□□□□□ -1.5
TnfP06804 Gm37445-201ENSMUST00000195318 242 ntBASIC5.71□□□□□ -1.5
TnfP06804 Gm19739-201ENSMUST00000195941 153 ntBASIC5.71□□□□□ -1.5
TnfP06804 Gm44214-201ENSMUST00000204153 606 ntBASIC5.71□□□□□ -1.5
TnfP06804 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.71□□□□□ -1.5
TnfP06804 Gm45660-201ENSMUST00000210267 151 ntBASIC5.71□□□□□ -1.5
TnfP06804 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC5.71□□□□□ -1.5
TnfP06804 Gm21041-201ENSMUST00000214829 823 ntBASIC5.71□□□□□ -1.5
TnfP06804 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.71□□□□□ -1.5
TnfP06804 Gm20368-201ENSMUST00000220716 301 ntBASIC5.71□□□□□ -1.5
TnfP06804 Gm32526-201ENSMUST00000221878 981 ntBASIC5.71□□□□□ -1.5
TnfP06804 AC154452.1-201ENSMUST00000225819 241 ntBASIC5.71□□□□□ -1.5
TnfP06804 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TnfP06804 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TnfP06804 Gm7676-201ENSMUST00000084055 319 ntBASIC5.71□□□□□ -1.5
TnfP06804 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TnfP06804 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TnfP06804 Gm20644-201ENSMUST00000176721 2063 ntBASIC5.71□□□□□ -1.5
TnfP06804 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.71□□□□□ -1.5
TnfP06804 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.71□□□□□ -1.5
TnfP06804 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
TnfP06804 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.71□□□□□ -1.5
TnfP06804 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TnfP06804 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TnfP06804 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
TnfP06804 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TnfP06804 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TnfP06804 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
TnfP06804 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.7□□□□□ -1.5
TnfP06804 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TnfP06804 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.7□□□□□ -1.5
TnfP06804 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
TnfP06804 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TnfP06804 Gm22266-201ENSMUST00000104011 138 ntBASIC5.7□□□□□ -1.5
TnfP06804 Gm24350-201ENSMUST00000104163 133 ntBASIC5.7□□□□□ -1.5
TnfP06804 Gm11447-201ENSMUST00000118983 858 ntBASIC5.7□□□□□ -1.5
TnfP06804 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.7□□□□□ -1.5
TnfP06804 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TnfP06804 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TnfP06804 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.7□□□□□ -1.5
TnfP06804 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TnfP06804 Gm26318-201ENSMUST00000176507 96 ntBASIC5.7□□□□□ -1.5
TnfP06804 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TnfP06804 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms