Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a4A2AX52 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a4A2AX52 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 Gm13213-201ENSMUST00000119668 474 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 Gm14881-201ENSMUST00000120366 372 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.52□□□□□ -1.69
Col6a4A2AX52 Gm25665-201ENSMUST00000157695 110 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 Gm26925-201ENSMUST00000182470 957 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 Mir6933-201ENSMUST00000184982 81 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 Gm37973-201ENSMUST00000195767 1289 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a4A2AX52 Gm7721-201ENSMUST00000200446 546 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 Gm44580-201ENSMUST00000206333 877 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 AC155808.1-201ENSMUST00000219288 409 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 AC132317.2-201ENSMUST00000227301 519 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Col6a4A2AX52 Gm22220-201ENSMUST00000082671 149 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Col6a4A2AX52 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Col6a4A2AX52 Gm13590-201ENSMUST00000120183 1588 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 AC134860.3-201ENSMUST00000223564 1300 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 Gm38362-201ENSMUST00000192999 2064 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a4A2AX52 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a4A2AX52 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Col6a4A2AX52 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Col6a4A2AX52 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a4A2AX52 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC4.52□□□□□ -1.69
Col6a4A2AX52 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Col6a4A2AX52 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Col6a4A2AX52 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Col6a4A2AX52 Gm7206-201ENSMUST00000117730 508 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 Gm11227-201ENSMUST00000119774 471 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 Gm6081-201ENSMUST00000134472 489 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 Gm16114-201ENSMUST00000161930 300 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 Gm27551-201ENSMUST00000184258 77 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.52□□□□□ -1.69
Col6a4A2AX52 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC4.52□□□□□ -1.69
Col6a4A2AX52 Mir409-201ENSMUST00000198153 79 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 Gm42461-201ENSMUST00000198627 1150 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 Gm45228-201ENSMUST00000206585 352 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 CT025665.1-201ENSMUST00000215251 1199 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC4.52□□□□□ -1.69
Col6a4A2AX52 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Col6a4A2AX52 Olfr878-201ENSMUST00000086061 1065 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a4A2AX52 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a4A2AX52 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Col6a4A2AX52 Gm43750-201ENSMUST00000199027 2493 ntBASIC4.52□□□□□ -1.69
Col6a4A2AX52 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Col6a4A2AX52 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a4A2AX52 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a4A2AX52 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a4A2AX52 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Gm26362-201ENSMUST00000158865 315 ntBASIC4.51□□□□□ -1.69
Col6a4A2AX52 Ear-ps9-201ENSMUST00000161963 460 ntBASIC4.51□□□□□ -1.69
Col6a4A2AX52 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Gm8214-201ENSMUST00000172123 351 ntBASIC4.51□□□□□ -1.69
Col6a4A2AX52 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Gm22650-201ENSMUST00000175138 105 ntBASIC4.51□□□□□ -1.69
Col6a4A2AX52 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Gm27387-201ENSMUST00000184583 116 ntBASIC4.51□□□□□ -1.69
Col6a4A2AX52 Gm28503-201ENSMUST00000185966 147 ntBASIC4.51□□□□□ -1.69
Col6a4A2AX52 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Ighv3-2-201ENSMUST00000191842 349 ntBASIC4.51□□□□□ -1.69
Col6a4A2AX52 Ighv1-45-201ENSMUST00000193677 352 ntBASIC4.51□□□□□ -1.69
Col6a4A2AX52 Gm2622-201ENSMUST00000200018 471 ntBASIC4.51□□□□□ -1.69
Col6a4A2AX52 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Gm43490-201ENSMUST00000197593 2652 ntBASIC4.51□□□□□ -1.69
Col6a4A2AX52 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a4A2AX52 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col6a4A2AX52 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC4.51□□□□□ -1.69
Col6a4A2AX52 Gm15790-201ENSMUST00000161109 1251 ntBASIC4.51□□□□□ -1.69
Col6a4A2AX52 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms