Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
H2afb3S4R1G7 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC5.27□□□□□ -1.57
H2afb3S4R1G7 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
H2afb3S4R1G7 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC5.27□□□□□ -1.57
H2afb3S4R1G7 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
H2afb3S4R1G7 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC5.27□□□□□ -1.57
H2afb3S4R1G7 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
H2afb3S4R1G7 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
H2afb3S4R1G7 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm43062-201ENSMUST00000196302 1319 ntBASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.26□□□□□ -1.57
H2afb3S4R1G7 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm25795-201ENSMUST00000104421 132 ntBASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm12985-201ENSMUST00000118376 183 ntBASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm12096-201ENSMUST00000121149 829 ntBASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm13593-201ENSMUST00000121329 692 ntBASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm23387-201ENSMUST00000158586 107 ntBASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm16297-201ENSMUST00000161466 459 ntBASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm18358-201ENSMUST00000173179 1277 ntBASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm19807-201ENSMUST00000173971 667 ntBASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC5.26□□□□□ -1.57
H2afb3S4R1G7 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm28080-201ENSMUST00000188552 722 ntBASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm21524-201ENSMUST00000190499 696 ntBASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm21715-201ENSMUST00000191056 694 ntBASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm37337-201ENSMUST00000192601 993 ntBASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm42708-201ENSMUST00000196332 905 ntBASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm8930-201ENSMUST00000201693 768 ntBASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm44181-201ENSMUST00000203106 483 ntBASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm44940-201ENSMUST00000206225 1247 ntBASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm7570-201ENSMUST00000215246 698 ntBASIC5.26□□□□□ -1.57
H2afb3S4R1G7 AC140409.4-201ENSMUST00000215757 538 ntBASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 AV026068-237ENSMUST00000226075 572 ntBASIC5.26□□□□□ -1.57
H2afb3S4R1G7 AC132317.2-201ENSMUST00000227301 519 ntBASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm8412-201ENSMUST00000077493 440 ntBASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
H2afb3S4R1G7 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 AC134860.3-201ENSMUST00000223564 1300 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm43328-201ENSMUST00000198544 1434 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Zfp389-201ENSMUST00000118425 675 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm6744-201ENSMUST00000119303 543 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm14842-201ENSMUST00000119577 269 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm12287-201ENSMUST00000119770 707 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm8317-201ENSMUST00000121261 471 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm12396-201ENSMUST00000121600 306 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm14122-201ENSMUST00000122076 973 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm26424-201ENSMUST00000122530 104 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm11962-201ENSMUST00000145746 255 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm24773-201ENSMUST00000158513 99 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Cfhr3-201ENSMUST00000170441 1022 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms