Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Gm37959-201ENSMUST00000191700 2897 ntBASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Gm12850-201ENSMUST00000119210 436 ntBASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Gm23224-201ENSMUST00000158122 271 ntBASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Gm6808-201ENSMUST00000162341 807 ntBASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Mir3095-201ENSMUST00000175552 87 ntBASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Gm38122-201ENSMUST00000192679 885 ntBASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Gm7990-201ENSMUST00000212126 593 ntBASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 AC166574.3-201ENSMUST00000226725 367 ntBASIC5.2□□□□□ -1.58
Trim3Q9R1R2 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Gm38299-201ENSMUST00000193214 3789 ntBASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim3Q9R1R2 AC159308.1-201ENSMUST00000216615 1351 ntBASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Gm26078-201ENSMUST00000104067 128 ntBASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Gm11561-201ENSMUST00000117429 417 ntBASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Gm12131-201ENSMUST00000117479 359 ntBASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Gm13245-201ENSMUST00000119646 260 ntBASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Gm11679-201ENSMUST00000121830 779 ntBASIC5.19□□□□□ -1.58
Trim3Q9R1R2 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Gm25152-201ENSMUST00000157117 114 ntBASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Gm24065-201ENSMUST00000157487 264 ntBASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Gm26069-201ENSMUST00000157497 277 ntBASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Gm37503-201ENSMUST00000192088 319 ntBASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Gm37073-201ENSMUST00000192469 1222 ntBASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Gm37308-201ENSMUST00000194684 100 ntBASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Gm3912-203ENSMUST00000211024 367 ntBASIC5.19□□□□□ -1.58
Trim3Q9R1R2 LOC665443-201ENSMUST00000212284 796 ntBASIC5.19□□□□□ -1.58
Trim3Q9R1R2 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC5.19□□□□□ -1.58
Trim3Q9R1R2 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC5.19□□□□□ -1.58
Trim3Q9R1R2 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim3Q9R1R2 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Trim3Q9R1R2 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Trim3Q9R1R2 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms