Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.27□□□□□ -1.57
Lima1Q9ERG0 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Gm11908-201ENSMUST00000117755 347 ntBASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Gm15741-201ENSMUST00000119401 754 ntBASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Gm23964-201ENSMUST00000157966 107 ntBASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Gm24731-201ENSMUST00000158227 131 ntBASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Gm23207-201ENSMUST00000158665 102 ntBASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Gm36999-201ENSMUST00000192756 1046 ntBASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Gm37030-201ENSMUST00000194254 295 ntBASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Gm18702-201ENSMUST00000196923 588 ntBASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Gm43973-201ENSMUST00000203562 210 ntBASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Gm18599-201ENSMUST00000206729 1125 ntBASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Gm38574-201ENSMUST00000211855 640 ntBASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Gm6175-201ENSMUST00000121351 400 ntBASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Gm23883-201ENSMUST00000122686 290 ntBASIC5.26□□□□□ -1.57
Lima1Q9ERG0 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Gm25459-201ENSMUST00000157953 114 ntBASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Gm27820-201ENSMUST00000183628 175 ntBASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Gm37659-201ENSMUST00000194574 111 ntBASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Gm43033-201ENSMUST00000199682 425 ntBASIC5.26□□□□□ -1.57
Lima1Q9ERG0 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Gm45185-201ENSMUST00000207556 404 ntBASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Gm6362-201ENSMUST00000217686 836 ntBASIC5.26□□□□□ -1.57
Lima1Q9ERG0 AC153961.1-201ENSMUST00000217760 385 ntBASIC5.26□□□□□ -1.57
Lima1Q9ERG0 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC5.26□□□□□ -1.57
Lima1Q9ERG0 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Gm272-201ENSMUST00000222073 919 ntBASIC5.26□□□□□ -1.57
Lima1Q9ERG0 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 CT009734.1-201ENSMUST00000227657 1687 ntBASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
Lima1Q9ERG0 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.25□□□□□ -1.57
Lima1Q9ERG0 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 105.1 ms