Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Gm8761-201ENSMUST00000121507 955 ntBASIC5.13□□□□□ -1.59
Use1Q9CQ56 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Gm24685-201ENSMUST00000157764 285 ntBASIC5.13□□□□□ -1.59
Use1Q9CQ56 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Gm3170-201ENSMUST00000168753 850 ntBASIC5.13□□□□□ -1.59
Use1Q9CQ56 Gm18343-201ENSMUST00000172802 604 ntBASIC5.13□□□□□ -1.59
Use1Q9CQ56 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Gm3348-201ENSMUST00000177813 850 ntBASIC5.13□□□□□ -1.59
Use1Q9CQ56 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Gm27468-201ENSMUST00000183577 106 ntBASIC5.13□□□□□ -1.59
Use1Q9CQ56 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Gm18865-201ENSMUST00000193011 1171 ntBASIC5.13□□□□□ -1.59
Use1Q9CQ56 Gm8826-201ENSMUST00000193161 948 ntBASIC5.13□□□□□ -1.59
Use1Q9CQ56 Igkv12-67-201ENSMUST00000197806 354 ntBASIC5.13□□□□□ -1.59
Use1Q9CQ56 Gm29745-201ENSMUST00000198005 687 ntBASIC5.13□□□□□ -1.59
Use1Q9CQ56 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Gm44559-201ENSMUST00000207177 1012 ntBASIC5.13□□□□□ -1.59
Use1Q9CQ56 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Use1Q9CQ56 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.13□□□□□ -1.59
Use1Q9CQ56 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC5.13□□□□□ -1.59
Use1Q9CQ56 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.13□□□□□ -1.59
Use1Q9CQ56 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.13□□□□□ -1.59
Use1Q9CQ56 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC5.13□□□□□ -1.59
Use1Q9CQ56 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm13590-201ENSMUST00000120183 1588 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Use1Q9CQ56 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm11212-201ENSMUST00000118337 618 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm14106-201ENSMUST00000119382 438 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm11533-201ENSMUST00000120287 477 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm23903-201ENSMUST00000157566 131 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm10087-201ENSMUST00000167650 330 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm20519-201ENSMUST00000173684 359 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm2058-201ENSMUST00000178791 560 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm10410-201ENSMUST00000180138 384 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm8941-201ENSMUST00000181451 899 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm26898-201ENSMUST00000181678 384 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm27781-201ENSMUST00000185185 92 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC5.12□□□□□ -1.59
Use1Q9CQ56 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm37700-201ENSMUST00000192617 965 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm44239-201ENSMUST00000204228 271 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm45700-201ENSMUST00000205866 347 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm10709-201ENSMUST00000213318 480 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm19168-201ENSMUST00000218804 1091 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 AC155941.1-201ENSMUST00000220223 529 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Use1Q9CQ56 CT954323.2-201ENSMUST00000222056 213 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 AC131029.2-201ENSMUST00000226696 628 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Vmn1r41-205ENSMUST00000227630 827 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Olfr467-201ENSMUST00000084756 927 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms