Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm15779-201ENSMUST00000117470 412 ntBASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Gm25058-201ENSMUST00000157365 128 ntBASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Gm23099-201ENSMUST00000083454 139 ntBASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Gm38026-201ENSMUST00000193284 3880 ntBASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Adgrl2-214ENSMUST00000199238 4670 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Gm12281-201ENSMUST00000119536 298 ntBASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Gm37581-201ENSMUST00000192371 988 ntBASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Prdm15-203ENSMUST00000121584 6194 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
Cdh23Q99PF4 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.21□□□□□ -1.57
Cdh23Q99PF4 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Cdh23Q99PF4 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.57
Cdh23Q99PF4 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Cdh23Q99PF4 Gm25726-201ENSMUST00000104529 129 ntBASIC5.21□□□□□ -1.57
Cdh23Q99PF4 Gm12850-201ENSMUST00000119210 436 ntBASIC5.21□□□□□ -1.57
Cdh23Q99PF4 Gm43604-201ENSMUST00000199799 705 ntBASIC5.21□□□□□ -1.57
Cdh23Q99PF4 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.21□□□□□ -1.57
Cdh23Q99PF4 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
Cdh23Q99PF4 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
Cdh23Q99PF4 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Cdh23Q99PF4 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.21□□□□□ -1.57
Cdh23Q99PF4 Snora52-201ENSMUST00000082732 137 ntBASIC5.21□□□□□ -1.57
Cdh23Q99PF4 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.21□□□□□ -1.57
Cdh23Q99PF4 n-R5s27-201ENSMUST00000093699 119 ntBASIC5.21□□□□□ -1.57
Cdh23Q99PF4 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Cdh23Q99PF4 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Cdh23Q99PF4 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Otud7b-203ENSMUST00000098849 8046 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Gm23673-201ENSMUST00000157474 298 ntBASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Gm19214-201ENSMUST00000191956 1083 ntBASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Gm9442-201ENSMUST00000194242 319 ntBASIC5.21□□□□□ -1.58
Cdh23Q99PF4 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Gm18618-201ENSMUST00000222211 473 ntBASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Gm37936-201ENSMUST00000194647 1322 ntBASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Cdh23Q99PF4 2600014E21Rik-201ENSMUST00000186411 4805 ntTSL 5 BASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Gm44441-201ENSMUST00000203642 2475 ntBASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.21□□□□□ -1.58
Cdh23Q99PF4 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Gm11874-201ENSMUST00000117437 130 ntBASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Gm25348-201ENSMUST00000158961 111 ntBASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.21□□□□□ -1.58
Cdh23Q99PF4 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Gm2314-201ENSMUST00000200391 586 ntBASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdh23Q99PF4 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Rnmt-201ENSMUST00000009679 5008 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Gm25169-201ENSMUST00000104190 129 ntBASIC5.2□□□□□ -1.58
Cdh23Q99PF4 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cdh23Q99PF4 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms