Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm42753-201ENSMUST00000196718 1268 ntBASIC5.6□□□□□ -1.51
Msh4Q99MT2 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Msh4Q99MT2 Gm6850-201ENSMUST00000210031 530 ntBASIC5.6□□□□□ -1.51
Msh4Q99MT2 Gm45525-201ENSMUST00000210800 389 ntBASIC5.6□□□□□ -1.51
Msh4Q99MT2 AC159476.2-201ENSMUST00000216221 418 ntBASIC5.6□□□□□ -1.51
Msh4Q99MT2 AC153975.1-201ENSMUST00000220087 926 ntBASIC5.6□□□□□ -1.51
Msh4Q99MT2 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Msh4Q99MT2 Gm18413-201ENSMUST00000221573 655 ntBASIC5.6□□□□□ -1.51
Msh4Q99MT2 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.6□□□□□ -1.51
Msh4Q99MT2 AC154335.1-201ENSMUST00000224744 395 ntBASIC5.6□□□□□ -1.51
Msh4Q99MT2 CU062626.1-201ENSMUST00000225248 505 ntBASIC5.6□□□□□ -1.51
Msh4Q99MT2 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Msh4Q99MT2 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Msh4Q99MT2 Gm23502-201ENSMUST00000083902 145 ntBASIC5.6□□□□□ -1.51
Msh4Q99MT2 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Msh4Q99MT2 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Msh4Q99MT2 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Msh4Q99MT2 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Msh4Q99MT2 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.6□□□□□ -1.51
Msh4Q99MT2 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Msh4Q99MT2 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Msh4Q99MT2 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Msh4Q99MT2 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Msh4Q99MT2 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Msh4Q99MT2 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.6□□□□□ -1.51
Msh4Q99MT2 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Msh4Q99MT2 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Msh4Q99MT2 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Msh4Q99MT2 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC5.59□□□□□ -1.51
Msh4Q99MT2 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.59□□□□□ -1.51
Msh4Q99MT2 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Gm16007-201ENSMUST00000117837 286 ntBASIC5.59□□□□□ -1.51
Msh4Q99MT2 Gm11797-201ENSMUST00000121336 754 ntBASIC5.59□□□□□ -1.51
Msh4Q99MT2 Gm12494-201ENSMUST00000121684 521 ntBASIC5.59□□□□□ -1.51
Msh4Q99MT2 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Msh4Q99MT2 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Gm15970-201ENSMUST00000160623 834 ntBASIC5.59□□□□□ -1.51
Msh4Q99MT2 Gm3091-201ENSMUST00000163408 484 ntBASIC5.59□□□□□ -1.51
Msh4Q99MT2 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Gm17164-201ENSMUST00000169013 506 ntBASIC5.59□□□□□ -1.51
Msh4Q99MT2 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Gm17511-201ENSMUST00000172206 342 ntBASIC5.59□□□□□ -1.51
Msh4Q99MT2 Gm24103-201ENSMUST00000174930 77 ntBASIC5.59□□□□□ -1.51
Msh4Q99MT2 Mir5125-201ENSMUST00000175240 79 ntBASIC5.59□□□□□ -1.51
Msh4Q99MT2 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.59□□□□□ -1.51
Msh4Q99MT2 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC5.59□□□□□ -1.51
Msh4Q99MT2 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Gm46223-201ENSMUST00000215196 675 ntBASIC5.59□□□□□ -1.51
Msh4Q99MT2 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Gm4057-201ENSMUST00000221407 368 ntBASIC5.59□□□□□ -1.51
Msh4Q99MT2 CT025598.1-201ENSMUST00000225140 427 ntBASIC5.59□□□□□ -1.51
Msh4Q99MT2 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.59□□□□□ -1.51
Msh4Q99MT2 AC164295.2-201ENSMUST00000228539 757 ntBASIC5.59□□□□□ -1.51
Msh4Q99MT2 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Msh4Q99MT2 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Gm5830-201ENSMUST00000049117 443 ntBASIC5.59□□□□□ -1.51
Msh4Q99MT2 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Msh4Q99MT2 n-R5s36-201ENSMUST00000082998 119 ntBASIC5.59□□□□□ -1.51
Msh4Q99MT2 Gm23686-201ENSMUST00000083241 164 ntBASIC5.59□□□□□ -1.51
Msh4Q99MT2 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Msh4Q99MT2 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Msh4Q99MT2 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
Msh4Q99MT2 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.58□□□□□ -1.52
Msh4Q99MT2 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC5.58□□□□□ -1.52
Msh4Q99MT2 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Msh4Q99MT2 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Msh4Q99MT2 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Msh4Q99MT2 Gm6744-201ENSMUST00000119303 543 ntBASIC5.58□□□□□ -1.52
Msh4Q99MT2 Gm15801-201ENSMUST00000120920 522 ntBASIC5.58□□□□□ -1.52
Msh4Q99MT2 Gm11446-201ENSMUST00000121319 866 ntBASIC5.58□□□□□ -1.52
Msh4Q99MT2 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC5.58□□□□□ -1.52
Msh4Q99MT2 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC5.58□□□□□ -1.52
Msh4Q99MT2 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.58□□□□□ -1.52
Msh4Q99MT2 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC5.58□□□□□ -1.52
Msh4Q99MT2 Gm26106-201ENSMUST00000157254 228 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 177.2 ms