Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc28bQ8CEG5 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc28bQ8CEG5 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm44667-201ENSMUST00000207632 3337 ntBASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm24272-201ENSMUST00000102329 98 ntBASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm13114-201ENSMUST00000117605 106 ntBASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm15772-201ENSMUST00000118533 438 ntBASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm3931-201ENSMUST00000119038 455 ntBASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm14489-201ENSMUST00000120868 901 ntBASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm22730-201ENSMUST00000158085 171 ntBASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm23050-201ENSMUST00000158775 165 ntBASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm9006-201ENSMUST00000165520 841 ntBASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm26057-201ENSMUST00000178099 165 ntBASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm44820-201ENSMUST00000207420 396 ntBASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 AC154219.1-201ENSMUST00000220764 1262 ntBASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm36262-201ENSMUST00000223274 499 ntBASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 AC154633.1-201ENSMUST00000223276 449 ntBASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm9519-201ENSMUST00000206108 1337 ntBASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Ccdc28bQ8CEG5 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Gm42841-201ENSMUST00000199806 1932 ntBASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Pramel-201ENSMUST00000118979 1383 ntBASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Gm14620-201ENSMUST00000120656 383 ntBASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Gm23883-201ENSMUST00000122686 290 ntBASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Gm22492-201ENSMUST00000157192 297 ntBASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Gm7745-201ENSMUST00000182235 973 ntBASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 AC117240.1-201ENSMUST00000199436 61 ntBASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Gm19033-201ENSMUST00000208516 964 ntBASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 AC166358.4-201ENSMUST00000223030 105 ntBASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ccdc28bQ8CEG5 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms