Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 AC159308.1-201ENSMUST00000216615 1351 ntBASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Gm14220-201ENSMUST00000118114 449 ntBASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Gm14769-201ENSMUST00000118590 432 ntBASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Gm15490-201ENSMUST00000119894 387 ntBASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Gm13367-201ENSMUST00000119955 796 ntBASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Gm5383-201ENSMUST00000121177 617 ntBASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Gm13077-201ENSMUST00000121941 484 ntBASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Gm25176-201ENSMUST00000122640 125 ntBASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Mir6539-201ENSMUST00000183732 110 ntBASIC5.48□□□□□ -1.53
Trub1Q8C0D0 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Gm28885-201ENSMUST00000185615 563 ntBASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Gm29755-201ENSMUST00000196976 948 ntBASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Mir6906-201ENSMUST00000198998 58 ntBASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Gm44253-201ENSMUST00000203387 628 ntBASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.48□□□□□ -1.53
Trub1Q8C0D0 CT025598.1-201ENSMUST00000225140 427 ntBASIC5.48□□□□□ -1.53
Trub1Q8C0D0 AC154461.5-201ENSMUST00000225429 774 ntBASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Gm37911-201ENSMUST00000193099 1545 ntBASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Trub1Q8C0D0 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Gm6134-201ENSMUST00000117265 171 ntBASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Gm23354-201ENSMUST00000158426 104 ntBASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Gm8256-201ENSMUST00000169178 453 ntBASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Gm36939-201ENSMUST00000194889 439 ntBASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Gm38670-201ENSMUST00000199248 77 ntBASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Gm43054-201ENSMUST00000199495 884 ntBASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Gm44307-201ENSMUST00000204466 764 ntBASIC5.47□□□□□ -1.53
Trub1Q8C0D0 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.47□□□□□ -1.53
Trub1Q8C0D0 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC5.47□□□□□ -1.53
Trub1Q8C0D0 AC158803.2-201ENSMUST00000219452 679 ntBASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Gm9202-201ENSMUST00000223036 437 ntBASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trub1Q8C0D0 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trub1Q8C0D0 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.47□□□□□ -1.53
Trub1Q8C0D0 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Trub1Q8C0D0 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.46□□□□□ -1.53
Trub1Q8C0D0 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Trub1Q8C0D0 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Trub1Q8C0D0 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.46□□□□□ -1.53
Trub1Q8C0D0 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Trub1Q8C0D0 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Gm13311-201ENSMUST00000117863 379 ntBASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Gm14836-201ENSMUST00000118567 471 ntBASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Gm15428-201ENSMUST00000121352 333 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms