Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm35648-201ENSMUST00000202304 475 ntBASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Glud-ps-201ENSMUST00000206310 657 ntBASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Gm5027-201ENSMUST00000206700 375 ntBASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Gm19880-201ENSMUST00000207731 318 ntBASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Gm4587-201ENSMUST00000209135 637 ntBASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Gm2961-201ENSMUST00000211074 772 ntBASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 CU024910.1-201ENSMUST00000214310 418 ntBASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Gm6776-201ENSMUST00000057752 900 ntBASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Gm25135-201ENSMUST00000082648 143 ntBASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Gm42661-201ENSMUST00000202364 1442 ntBASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Gm42561-201ENSMUST00000202563 1442 ntBASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm2080-201ENSMUST00000211299 1573 ntBASIC7.84□□□□□ -1.15
Usp40Q8BWR4 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm42440-201ENSMUST00000197906 2284 ntBASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm44255-201ENSMUST00000203456 2053 ntBASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm8858-201ENSMUST00000118259 342 ntBASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm11826-201ENSMUST00000118781 438 ntBASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm12654-201ENSMUST00000120387 587 ntBASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm5834-201ENSMUST00000126680 1026 ntBASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm23116-201ENSMUST00000158481 67 ntBASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm3170-201ENSMUST00000168753 850 ntBASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm8032-201ENSMUST00000171009 574 ntBASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm7335-201ENSMUST00000172475 373 ntBASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm5139-201ENSMUST00000175943 249 ntBASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm3348-201ENSMUST00000177813 850 ntBASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm27033-201ENSMUST00000183226 544 ntBASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm27355-201ENSMUST00000185045 128 ntBASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm29454-201ENSMUST00000190805 393 ntBASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm7825-201ENSMUST00000204046 416 ntBASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm4928-201ENSMUST00000219622 850 ntBASIC7.84□□□□□ -1.15
Usp40Q8BWR4 AC154806.3-201ENSMUST00000227376 439 ntBASIC7.84□□□□□ -1.15
Usp40Q8BWR4 AC154806.4-201ENSMUST00000227406 439 ntBASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 n-R5s173-201ENSMUST00000082620 119 ntBASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm23058-201ENSMUST00000093703 107 ntBASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm37553-201ENSMUST00000194135 1602 ntBASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp40Q8BWR4 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.16
Usp40Q8BWR4 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
Usp40Q8BWR4 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Gm11212-201ENSMUST00000118337 618 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Gm15400-201ENSMUST00000118944 601 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Gm16200-201ENSMUST00000120385 331 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Gm23211-201ENSMUST00000122717 308 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Gm15501-202ENSMUST00000140687 625 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Gm24295-201ENSMUST00000158298 131 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Mir1963-201ENSMUST00000158594 59 ntBASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Usp40Q8BWR4 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms