Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim41Q5NCC3 AC022775.1-201ENSMUST00000228163 2698 ntBASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim41Q5NCC3 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim41Q5NCC3 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Gm14995-201ENSMUST00000117135 391 ntBASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Gm15715-201ENSMUST00000118032 283 ntBASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Gm15078-201ENSMUST00000118371 782 ntBASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Zfp389-201ENSMUST00000118425 675 ntBASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Gm14769-201ENSMUST00000118590 432 ntBASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Gm13593-201ENSMUST00000121329 692 ntBASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Gm25722-201ENSMUST00000157498 279 ntBASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Gm27299-201ENSMUST00000184593 103 ntBASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Gm27286-201ENSMUST00000184934 179 ntBASIC11.88□□□□□ -0.51
Trim41Q5NCC3 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Gm42999-201ENSMUST00000198049 786 ntBASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Gm3189-201ENSMUST00000205595 832 ntBASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trim41Q5NCC3 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim41Q5NCC3 AC160114.1-201ENSMUST00000221930 365 ntBASIC11.88□□□□□ -0.51
Trim41Q5NCC3 AC122858.1-201ENSMUST00000226212 433 ntBASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Dennd6a-204ENSMUST00000224248 2775 ntBASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim41Q5NCC3 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim41Q5NCC3 AC105407.2-205ENSMUST00000224680 2733 ntBASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Gm25537-201ENSMUST00000103851 109 ntBASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Gm24434-201ENSMUST00000104081 132 ntBASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Gm14794-201ENSMUST00000118181 192 ntBASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Gm12135-201ENSMUST00000119170 466 ntBASIC11.87□□□□□ -0.51
Trim41Q5NCC3 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Gm26557-201ENSMUST00000180756 493 ntBASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Gm28151-201ENSMUST00000189404 951 ntBASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Ighv1-3-201ENSMUST00000192764 302 ntBASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Gm2229-201ENSMUST00000193328 710 ntBASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Gm17950-201ENSMUST00000214617 646 ntBASIC11.87□□□□□ -0.51
Trim41Q5NCC3 AC134537.2-201ENSMUST00000217770 575 ntBASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim41Q5NCC3 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim41Q5NCC3 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trim41Q5NCC3 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trim41Q5NCC3 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Gm43123-201ENSMUST00000201893 3471 ntBASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Snhg17-209ENSMUST00000186993 3144 ntBASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Gm13983-201ENSMUST00000118018 865 ntBASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Gm6031-201ENSMUST00000121314 1054 ntBASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Gm15959-201ENSMUST00000121724 368 ntBASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim41Q5NCC3 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Gm5456-201ENSMUST00000170706 844 ntBASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Gm17045-201ENSMUST00000178600 844 ntBASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Gm18805-201ENSMUST00000206872 655 ntBASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Gm45899-201ENSMUST00000212196 1276 ntBASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Gm17890-201ENSMUST00000221419 757 ntBASIC11.86□□□□□ -0.51
Trim41Q5NCC3 CT009733.1-201ENSMUST00000225322 425 ntBASIC11.86□□□□□ -0.51
Trim41Q5NCC3 AC132260.1-201ENSMUST00000225499 734 ntBASIC11.86□□□□□ -0.51
Trim41Q5NCC3 AC131747.1-201ENSMUST00000226159 793 ntBASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim41Q5NCC3 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms