Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC6.07□□□□□ -1.44
CiitaP79621 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CiitaP79621 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CiitaP79621 AC105407.2-201ENSMUST00000223707 3911 ntBASIC6.06□□□□□ -1.44
CiitaP79621 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC6.06□□□□□ -1.44
CiitaP79621 Gm42992-201ENSMUST00000197043 6836 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Gm13590-201ENSMUST00000120183 1588 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CiitaP79621 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CiitaP79621 Gm42923-201ENSMUST00000198438 2896 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CiitaP79621 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CiitaP79621 Gm11970-201ENSMUST00000116105 320 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Gm11561-201ENSMUST00000117429 417 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Gm13451-201ENSMUST00000117649 592 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Gm14871-201ENSMUST00000119056 194 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Gm13991-201ENSMUST00000120190 648 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Gm13593-201ENSMUST00000121329 692 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Gm23211-201ENSMUST00000122717 308 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Gm26086-201ENSMUST00000157902 263 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Gm24216-201ENSMUST00000158259 117 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Gm24940-201ENSMUST00000158326 108 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Gm3242-201ENSMUST00000171273 485 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Gm24561-201ENSMUST00000175182 95 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Gm18558-201ENSMUST00000186253 1214 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Gm2367-201ENSMUST00000192374 472 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CiitaP79621 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC6.06□□□□□ -1.44
CiitaP79621 Gm44319-201ENSMUST00000196974 93 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Gm6543-201ENSMUST00000197353 808 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Gm43554-201ENSMUST00000199987 186 ntBASIC6.06□□□□□ -1.44
CiitaP79621 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC6.06□□□□□ -1.44
CiitaP79621 Gm35648-201ENSMUST00000202304 475 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CiitaP79621 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC6.06□□□□□ -1.44
CiitaP79621 Clec2j-202ENSMUST00000203658 606 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC6.06□□□□□ -1.44
CiitaP79621 Gm2961-201ENSMUST00000211074 772 ntBASIC6.06□□□□□ -1.44
CiitaP79621 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC6.06□□□□□ -1.44
CiitaP79621 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC6.06□□□□□ -1.44
CiitaP79621 CT030194.2-201ENSMUST00000225752 379 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CiitaP79621 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CiitaP79621 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CiitaP79621 Gm7808-201ENSMUST00000082002 387 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CiitaP79621 Gm43469-201ENSMUST00000196084 4634 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CiitaP79621 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CiitaP79621 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CiitaP79621 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
CiitaP79621 Gm42436-201ENSMUST00000198804 3656 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CiitaP79621 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CiitaP79621 Gm18719-201ENSMUST00000196696 1413 ntBASIC6.06□□□□□ -1.44
CiitaP79621 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CiitaP79621 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CiitaP79621 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CiitaP79621 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CiitaP79621 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC6.05□□□□□ -1.44
CiitaP79621 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CiitaP79621 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC6.05□□□□□ -1.44
CiitaP79621 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.05□□□□□ -1.44
CiitaP79621 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CiitaP79621 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CiitaP79621 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CiitaP79621 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CiitaP79621 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CiitaP79621 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CiitaP79621 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CiitaP79621 Gm6884-201ENSMUST00000119318 615 ntBASIC6.05□□□□□ -1.44
CiitaP79621 Gm14267-201ENSMUST00000119751 496 ntBASIC6.05□□□□□ -1.44
CiitaP79621 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CiitaP79621 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC6.05□□□□□ -1.44
CiitaP79621 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CiitaP79621 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CiitaP79621 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CiitaP79621 Gm23633-201ENSMUST00000175293 119 ntBASIC6.05□□□□□ -1.44
CiitaP79621 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC6.05□□□□□ -1.44
CiitaP79621 Gm29474-201ENSMUST00000187688 379 ntBASIC6.05□□□□□ -1.44
CiitaP79621 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC6.05□□□□□ -1.44
CiitaP79621 Gm38040-201ENSMUST00000193505 225 ntBASIC6.05□□□□□ -1.44
CiitaP79621 Igkv15-101-201ENSMUST00000195917 299 ntBASIC6.05□□□□□ -1.44
CiitaP79621 Gm44431-201ENSMUST00000203500 413 ntBASIC6.05□□□□□ -1.44
CiitaP79621 Gm44683-201ENSMUST00000209088 484 ntBASIC6.05□□□□□ -1.44
CiitaP79621 Gm19885-201ENSMUST00000212853 343 ntBASIC6.05□□□□□ -1.44
CiitaP79621 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CiitaP79621 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CiitaP79621 AC134860.4-201ENSMUST00000223592 978 ntBASIC6.05□□□□□ -1.44
CiitaP79621 AC160980.2-201ENSMUST00000225131 949 ntBASIC6.05□□□□□ -1.44
CiitaP79621 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
CiitaP79621 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC6.05□□□□□ -1.44
CiitaP79621 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CiitaP79621 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.05□□□□□ -1.44
CiitaP79621 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms