Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm29369-201ENSMUST00000190674 615 ntBASIC5.88□□□□□ -1.47
Sf3b6P59708 Gm18407-201ENSMUST00000192126 790 ntBASIC5.88□□□□□ -1.47
Sf3b6P59708 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC5.88□□□□□ -1.47
Sf3b6P59708 Gm42963-201ENSMUST00000202943 1217 ntBASIC5.88□□□□□ -1.47
Sf3b6P59708 Gm45192-201ENSMUST00000206749 283 ntBASIC5.88□□□□□ -1.47
Sf3b6P59708 Gm45042-201ENSMUST00000207377 211 ntBASIC5.88□□□□□ -1.47
Sf3b6P59708 Gm19092-201ENSMUST00000209036 969 ntBASIC5.88□□□□□ -1.47
Sf3b6P59708 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sf3b6P59708 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sf3b6P59708 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Sf3b6P59708 AC164117.2-201ENSMUST00000222090 327 ntBASIC5.88□□□□□ -1.47
Sf3b6P59708 AC154834.1-201ENSMUST00000224697 358 ntBASIC5.88□□□□□ -1.47
Sf3b6P59708 AC165260.3-201ENSMUST00000225101 665 ntBASIC5.88□□□□□ -1.47
Sf3b6P59708 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC5.88□□□□□ -1.47
Sf3b6P59708 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sf3b6P59708 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sf3b6P59708 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sf3b6P59708 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Sf3b6P59708 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Sf3b6P59708 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
Sf3b6P59708 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.88□□□□□ -1.47
Sf3b6P59708 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sf3b6P59708 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sf3b6P59708 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sf3b6P59708 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
Sf3b6P59708 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sf3b6P59708 Gm9496-201ENSMUST00000191295 1601 ntBASIC5.88□□□□□ -1.47
Sf3b6P59708 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sf3b6P59708 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sf3b6P59708 AC122305.1-201ENSMUST00000214803 3921 ntBASIC5.88□□□□□ -1.47
Sf3b6P59708 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sf3b6P59708 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Sf3b6P59708 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Sf3b6P59708 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Sf3b6P59708 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC5.88□□□□□ -1.47
Sf3b6P59708 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.88□□□□□ -1.47
Sf3b6P59708 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sf3b6P59708 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sf3b6P59708 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Sf3b6P59708 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Sf3b6P59708 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC5.87□□□□□ -1.47
Sf3b6P59708 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Sf3b6P59708 AC116476.1-201ENSMUST00000226274 2318 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sf3b6P59708 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sf3b6P59708 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sf3b6P59708 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm14050-201ENSMUST00000117052 346 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm13265-201ENSMUST00000118090 421 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm8475-201ENSMUST00000118211 526 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm12447-201ENSMUST00000119110 470 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm14106-201ENSMUST00000119382 438 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm13338-201ENSMUST00000120235 361 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm11726-201ENSMUST00000121028 424 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm22158-201ENSMUST00000158411 126 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm5929-201ENSMUST00000166883 487 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm3141-201ENSMUST00000168726 499 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sf3b6P59708 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sf3b6P59708 Mir3060-201ENSMUST00000175339 83 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm6489-201ENSMUST00000178167 696 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm8245-201ENSMUST00000182434 987 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sf3b6P59708 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sf3b6P59708 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sf3b6P59708 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm43147-201ENSMUST00000196944 542 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm42465-201ENSMUST00000197036 492 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sf3b6P59708 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC5.87□□□□□ -1.47
Sf3b6P59708 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm9685-201ENSMUST00000211275 538 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC5.87□□□□□ -1.47
Sf3b6P59708 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm29809-201ENSMUST00000218423 493 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm7530-201ENSMUST00000218466 605 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm18601-201ENSMUST00000220831 634 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC5.87□□□□□ -1.47
Sf3b6P59708 AC165283.1-201ENSMUST00000223390 307 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 CT025667.1-201ENSMUST00000225872 382 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 AC144798.1-201ENSMUST00000228120 391 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Sf3b6P59708 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Sf3b6P59708 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sf3b6P59708 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sf3b6P59708 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sf3b6P59708 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm23623-201ENSMUST00000082461 107 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 Rny3-201ENSMUST00000083011 102 ntBASIC5.87□□□□□ -1.47
Sf3b6P59708 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sf3b6P59708 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sf3b6P59708 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 98 ms