Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Rfx1P48377 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC7.55□□□□□ -1.2
Rfx1P48377 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC7.55□□□□□ -1.2
Rfx1P48377 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Rfx1P48377 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Rfx1P48377 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Rfx1P48377 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Rfx1P48377 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC7.55□□□□□ -1.2
Rfx1P48377 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Rfx1P48377 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC7.55□□□□□ -1.2
Rfx1P48377 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Rfx1P48377 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC7.55□□□□□ -1.2
Rfx1P48377 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Rfx1P48377 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC7.55□□□□□ -1.2
Rfx1P48377 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Rfx1P48377 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC7.55□□□□□ -1.2
Rfx1P48377 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC7.55□□□□□ -1.2
Rfx1P48377 CT009757.5-201ENSMUST00000221858 3425 ntBASIC7.55□□□□□ -1.2
Rfx1P48377 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Rfx1P48377 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Rfx1P48377 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Rfx1P48377 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Rfx1P48377 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Rfx1P48377 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rfx1P48377 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rfx1P48377 AC121094.1-201ENSMUST00000224766 1345 ntBASIC7.54□□□□□ -1.2
Rfx1P48377 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Rfx1P48377 Ankrd55-205ENSMUST00000223871 3209 ntBASIC7.54□□□□□ -1.2
Rfx1P48377 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Rfx1P48377 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Rfx1P48377 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Rfx1P48377 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Rfx1P48377 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rfx1P48377 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rfx1P48377 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rfx1P48377 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rfx1P48377 Gm37730-201ENSMUST00000192432 2211 ntBASIC7.54□□□□□ -1.2
Rfx1P48377 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC7.54□□□□□ -1.2
Rfx1P48377 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Rfx1P48377 Gm22256-201ENSMUST00000102291 107 ntBASIC7.54□□□□□ -1.2
Rfx1P48377 Gm25916-201ENSMUST00000104263 131 ntBASIC7.54□□□□□ -1.2
Rfx1P48377 Gm14751-201ENSMUST00000117693 222 ntBASIC7.54□□□□□ -1.2
Rfx1P48377 Gm7700-201ENSMUST00000120273 970 ntBASIC7.54□□□□□ -1.2
Rfx1P48377 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Rfx1P48377 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC7.54□□□□□ -1.2
Rfx1P48377 Gm25185-201ENSMUST00000157754 96 ntBASIC7.54□□□□□ -1.2
Rfx1P48377 Gm23025-201ENSMUST00000158769 111 ntBASIC7.54□□□□□ -1.2
Rfx1P48377 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC7.54□□□□□ -1.2
Rfx1P48377 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Rfx1P48377 Gm23186-201ENSMUST00000180078 107 ntBASIC7.54□□□□□ -1.2
Rfx1P48377 Gm27985-201ENSMUST00000185112 378 ntBASIC7.54□□□□□ -1.2
Rfx1P48377 Gm28846-201ENSMUST00000189161 368 ntBASIC7.54□□□□□ -1.2
Rfx1P48377 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Rfx1P48377 Gm43171-201ENSMUST00000199882 291 ntBASIC7.54□□□□□ -1.2
Rfx1P48377 Gm18691-201ENSMUST00000203593 872 ntBASIC7.54□□□□□ -1.2
Rfx1P48377 Gm17822-201ENSMUST00000204307 351 ntBASIC7.54□□□□□ -1.2
Rfx1P48377 Gm29920-201ENSMUST00000206876 754 ntBASIC7.54□□□□□ -1.2
Rfx1P48377 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC7.54□□□□□ -1.2
Rfx1P48377 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC7.54□□□□□ -1.2
Rfx1P48377 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC7.54□□□□□ -1.2
Rfx1P48377 Gm45725-201ENSMUST00000212962 337 ntBASIC7.54□□□□□ -1.2
Rfx1P48377 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC7.54□□□□□ -1.2
Rfx1P48377 AC153847.1-201ENSMUST00000214524 353 ntBASIC7.54□□□□□ -1.2
Rfx1P48377 Gm19599-201ENSMUST00000218898 358 ntBASIC7.54□□□□□ -1.2
Rfx1P48377 AC153943.1-201ENSMUST00000219312 256 ntBASIC7.54□□□□□ -1.2
Rfx1P48377 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC7.54□□□□□ -1.2
Rfx1P48377 Gm5374-202ENSMUST00000222910 314 ntBASIC7.54□□□□□ -1.2
Rfx1P48377 AC155314.1-201ENSMUST00000227624 508 ntBASIC7.54□□□□□ -1.2
Rfx1P48377 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Rfx1P48377 Gm37531-201ENSMUST00000191628 5415 ntBASIC7.54□□□□□ -1.2
Rfx1P48377 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Rfx1P48377 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Rfx1P48377 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC7.54□□□□□ -1.2
Rfx1P48377 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC7.54□□□□□ -1.2
Rfx1P48377 Gm44697-201ENSMUST00000207756 1679 ntBASIC7.54□□□□□ -1.2
Rfx1P48377 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rfx1P48377 AC116476.1-201ENSMUST00000226274 2318 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC7.53□□□□□ -1.2
Rfx1P48377 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Rfx1P48377 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Rfx1P48377 Fam35a-206ENSMUST00000228626 3100 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 AC164107.1-202ENSMUST00000228953 1816 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 AC121960.2-201ENSMUST00000227349 3446 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rfx1P48377 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rfx1P48377 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC7.53□□□□□ -1.2
Rfx1P48377 Gm16082-201ENSMUST00000115992 377 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 Gm11913-201ENSMUST00000119094 336 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Rfx1P48377 Gm14506-201ENSMUST00000121165 536 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 Gm23885-201ENSMUST00000122682 294 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Rfx1P48377 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC7.53□□□□□ -1.2
Rfx1P48377 Magea9-ps-201ENSMUST00000140655 732 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 Magea9-ps-202ENSMUST00000167328 899 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 Gm23632-201ENSMUST00000175289 125 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC7.53□□□□□ -1.2
Rfx1P48377 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms