Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
HttP42859 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HttP42859 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC5.48□□□□□ -1.53
HttP42859 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HttP42859 Mir546-201ENSMUST00000102105 121 ntBASIC5.48□□□□□ -1.53
HttP42859 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.48□□□□□ -1.53
HttP42859 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HttP42859 Gm6647-201ENSMUST00000170514 641 ntBASIC5.48□□□□□ -1.53
HttP42859 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
HttP42859 AC140930.4-201ENSMUST00000220750 150 ntBASIC5.48□□□□□ -1.53
HttP42859 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
HttP42859 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HttP42859 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.48□□□□□ -1.53
HttP42859 1500004A13Rik-202ENSMUST00000183707 6054 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HttP42859 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.48□□□□□ -1.53
HttP42859 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HttP42859 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC5.48□□□□□ -1.53
HttP42859 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
HttP42859 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HttP42859 Gm24124-201ENSMUST00000104103 132 ntBASIC5.48□□□□□ -1.53
HttP42859 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HttP42859 Gm22119-201ENSMUST00000175594 99 ntBASIC5.48□□□□□ -1.53
HttP42859 Gm27883-201ENSMUST00000183941 102 ntBASIC5.48□□□□□ -1.53
HttP42859 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
HttP42859 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HttP42859 Gm7967-202ENSMUST00000191042 5042 ntBASIC5.48□□□□□ -1.53
HttP42859 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HttP42859 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC5.47□□□□□ -1.53
HttP42859 Smpd4-201ENSMUST00000006053 4623 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HttP42859 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HttP42859 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HttP42859 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HttP42859 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HttP42859 Nlrc5-207ENSMUST00000211816 7578 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
HttP42859 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
HttP42859 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HttP42859 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC5.47□□□□□ -1.53
HttP42859 Gm22819-201ENSMUST00000157445 303 ntBASIC5.47□□□□□ -1.53
HttP42859 Gm37416-201ENSMUST00000193596 318 ntBASIC5.47□□□□□ -1.53
HttP42859 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.47□□□□□ -1.53
HttP42859 Gm18016-201ENSMUST00000216119 801 ntBASIC5.47□□□□□ -1.53
HttP42859 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HttP42859 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HttP42859 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HttP42859 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HttP42859 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC5.47□□□□□ -1.53
HttP42859 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
HttP42859 Gm38082-201ENSMUST00000192800 6882 ntBASIC5.47□□□□□ -1.53
HttP42859 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HttP42859 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
HttP42859 Gm45767-201ENSMUST00000212778 4561 ntBASIC5.47□□□□□ -1.53
HttP42859 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HttP42859 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC5.47□□□□□ -1.53
HttP42859 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HttP42859 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HttP42859 Esd-ps-201ENSMUST00000170684 847 ntBASIC5.47□□□□□ -1.53
HttP42859 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HttP42859 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.47□□□□□ -1.53
HttP42859 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.47□□□□□ -1.53
HttP42859 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HttP42859 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
HttP42859 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HttP42859 Scn2a-205ENSMUST00000200829 6348 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
HttP42859 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC5.47□□□□□ -1.53
HttP42859 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HttP42859 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HttP42859 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HttP42859 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HttP42859 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.47□□□□□ -1.53
HttP42859 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HttP42859 Fndc1-202ENSMUST00000097425 5845 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
HttP42859 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC5.46□□□□□ -1.53
HttP42859 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.53
HttP42859 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HttP42859 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
HttP42859 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.46□□□□□ -1.53
HttP42859 Gm13501-201ENSMUST00000118477 979 ntBASIC5.46□□□□□ -1.53
HttP42859 Gm4832-201ENSMUST00000182679 399 ntBASIC5.46□□□□□ -1.53
HttP42859 Gm44234-201ENSMUST00000204246 900 ntBASIC5.46□□□□□ -1.53
HttP42859 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC5.46□□□□□ -1.53
HttP42859 Gm9597-202ENSMUST00000227632 1387 ntBASIC5.46□□□□□ -1.53
HttP42859 C78859-201ENSMUST00000212800 5943 ntBASIC5.46□□□□□ -1.53
HttP42859 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.46□□□□□ -1.53
HttP42859 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.53
HttP42859 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
HttP42859 AC120347.1-201ENSMUST00000223326 1639 ntBASIC5.46□□□□□ -1.54
HttP42859 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HttP42859 Abca8b-202ENSMUST00000106669 5052 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
HttP42859 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
HttP42859 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HttP42859 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HttP42859 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HttP42859 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HttP42859 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HttP42859 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC5.46□□□□□ -1.54
HttP42859 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC5.46□□□□□ -1.54
HttP42859 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
HttP42859 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.46□□□□□ -1.54
HttP42859 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HttP42859 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms