Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 AC168881.1-201ENSMUST00000226018 430 ntBASIC8.05□□□□□ -1.12
Chd1P40201 AC161269.1-201ENSMUST00000228426 318 ntBASIC8.05□□□□□ -1.12
Chd1P40201 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Chd1P40201 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Chd1P40201 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Chd1P40201 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Chd1P40201 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Chd1P40201 Gm37806-201ENSMUST00000194524 6387 ntBASIC8.05□□□□□ -1.12
Chd1P40201 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Chd1P40201 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Chd1P40201 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Chd1P40201 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Chd1P40201 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Chd1P40201 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Chd1P40201 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
Chd1P40201 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Chd1P40201 Gm13567-201ENSMUST00000118026 247 ntBASIC8.04□□□□□ -1.12
Chd1P40201 Gm6884-201ENSMUST00000119318 615 ntBASIC8.04□□□□□ -1.12
Chd1P40201 Gm12094-201ENSMUST00000121781 472 ntBASIC8.04□□□□□ -1.12
Chd1P40201 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Chd1P40201 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC8.04□□□□□ -1.12
Chd1P40201 Gm44108-201ENSMUST00000203525 422 ntBASIC8.04□□□□□ -1.12
Chd1P40201 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC8.04□□□□□ -1.12
Chd1P40201 AC154305.3-201ENSMUST00000224661 552 ntBASIC8.04□□□□□ -1.12
Chd1P40201 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Chd1P40201 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Chd1P40201 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC8.04□□□□□ -1.12
Chd1P40201 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Chd1P40201 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Chd1P40201 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Chd1P40201 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Chd1P40201 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Chd1P40201 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC8.04□□□□□ -1.12
Chd1P40201 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Chd1P40201 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC8.03□□□□□ -1.12
Chd1P40201 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC8.03□□□□□ -1.12
Chd1P40201 Gm17014-201ENSMUST00000120765 168 ntBASIC8.03□□□□□ -1.12
Chd1P40201 Gm20614-201ENSMUST00000177106 632 ntBASIC8.03□□□□□ -1.12
Chd1P40201 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Chd1P40201 Gm2623-201ENSMUST00000199229 286 ntBASIC8.03□□□□□ -1.12
Chd1P40201 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC8.03□□□□□ -1.12
Chd1P40201 Gm32453-201ENSMUST00000204183 456 ntBASIC8.03□□□□□ -1.12
Chd1P40201 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC8.03□□□□□ -1.12
Chd1P40201 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC8.03□□□□□ -1.12
Chd1P40201 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC8.03□□□□□ -1.12
Chd1P40201 AC114573.1-201ENSMUST00000224120 1210 ntBASIC8.03□□□□□ -1.12
Chd1P40201 AC154640.4-201ENSMUST00000226647 4640 ntBASIC8.03□□□□□ -1.12
Chd1P40201 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC8.03□□□□□ -1.12
Chd1P40201 Gm38070-201ENSMUST00000191850 6480 ntBASIC8.03□□□□□ -1.12
Chd1P40201 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Chd1P40201 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Chd1P40201 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC8.03□□□□□ -1.12
Chd1P40201 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Chd1P40201 Gm38198-201ENSMUST00000191772 3581 ntBASIC8.03□□□□□ -1.12
Chd1P40201 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Chd1P40201 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
Chd1P40201 Gm23593-201ENSMUST00000104309 120 ntBASIC8.03□□□□□ -1.12
Chd1P40201 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC8.03□□□□□ -1.12
Chd1P40201 Gm14753-201ENSMUST00000118503 246 ntBASIC8.03□□□□□ -1.12
Chd1P40201 Gm15828-201ENSMUST00000119911 522 ntBASIC8.03□□□□□ -1.12
Chd1P40201 Gm14656-201ENSMUST00000120342 502 ntBASIC8.03□□□□□ -1.12
Chd1P40201 Gm5963-201ENSMUST00000143451 236 ntBASIC8.03□□□□□ -1.12
Chd1P40201 Gm5699-201ENSMUST00000152491 723 ntBASIC8.03□□□□□ -1.12
Chd1P40201 Gm22211-201ENSMUST00000158097 156 ntBASIC8.03□□□□□ -1.12
Chd1P40201 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Chd1P40201 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC8.03□□□□□ -1.12
Chd1P40201 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Chd1P40201 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Chd1P40201 Gm19035-201ENSMUST00000193299 1742 ntBASIC8.03□□□□□ -1.12
Chd1P40201 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.12
Chd1P40201 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Chd1P40201 Gm18259-201ENSMUST00000220991 2010 ntBASIC8.02□□□□□ -1.13
Chd1P40201 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Chd1P40201 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Chd1P40201 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Chd1P40201 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Chd1P40201 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Chd1P40201 Gm22613-201ENSMUST00000122679 292 ntBASIC8.02□□□□□ -1.13
Chd1P40201 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Chd1P40201 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Chd1P40201 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC8.02□□□□□ -1.13
Chd1P40201 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Chd1P40201 Gm37088-201ENSMUST00000193887 406 ntBASIC8.02□□□□□ -1.13
Chd1P40201 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Chd1P40201 Gm18618-201ENSMUST00000222211 473 ntBASIC8.02□□□□□ -1.13
Chd1P40201 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Chd1P40201 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Chd1P40201 Olfr881-201ENSMUST00000074611 948 ntBASIC8.02□□□□□ -1.13
Chd1P40201 n-R5s88-201ENSMUST00000083173 118 ntBASIC8.02□□□□□ -1.13
Chd1P40201 Gm23686-201ENSMUST00000083241 164 ntBASIC8.02□□□□□ -1.13
Chd1P40201 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Chd1P40201 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Chd1P40201 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Chd1P40201 CT025556.1-201ENSMUST00000222965 1884 ntBASIC8.02□□□□□ -1.13
Chd1P40201 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
Chd1P40201 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Chd1P40201 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Chd1P40201 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Chd1P40201 AC154329.1-201ENSMUST00000224408 3129 ntBASIC8.01□□□□□ -1.13
Chd1P40201 Gm15791-201ENSMUST00000120365 319 ntBASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms