Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC6.5□□□□□ -1.37
Traf1P39428 Gm8911-201ENSMUST00000213986 652 ntBASIC6.5□□□□□ -1.37
Traf1P39428 CU024910.1-201ENSMUST00000214310 418 ntBASIC6.5□□□□□ -1.37
Traf1P39428 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC6.5□□□□□ -1.37
Traf1P39428 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC6.5□□□□□ -1.37
Traf1P39428 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC6.5□□□□□ -1.37
Traf1P39428 AC158536.1-201ENSMUST00000222510 256 ntBASIC6.5□□□□□ -1.37
Traf1P39428 AC154738.4-201ENSMUST00000228310 414 ntBASIC6.5□□□□□ -1.37
Traf1P39428 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Traf1P39428 Gm42992-201ENSMUST00000197043 6836 ntBASIC6.5□□□□□ -1.37
Traf1P39428 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC6.5□□□□□ -1.37
Traf1P39428 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Traf1P39428 Gm37846-201ENSMUST00000191840 3774 ntBASIC6.5□□□□□ -1.37
Traf1P39428 Gm37311-201ENSMUST00000195541 2024 ntBASIC6.5□□□□□ -1.37
Traf1P39428 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Traf1P39428 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Traf1P39428 Gm37092-201ENSMUST00000193381 1518 ntBASIC6.5□□□□□ -1.37
Traf1P39428 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Traf1P39428 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Traf1P39428 Gm37470-201ENSMUST00000193378 2798 ntBASIC6.49□□□□□ -1.37
Traf1P39428 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Traf1P39428 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Traf1P39428 AC121870.1-201ENSMUST00000216279 4879 ntBASIC6.49□□□□□ -1.37
Traf1P39428 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Traf1P39428 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Traf1P39428 Gm15074-201ENSMUST00000117603 936 ntBASIC6.49□□□□□ -1.37
Traf1P39428 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.49□□□□□ -1.37
Traf1P39428 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC6.49□□□□□ -1.37
Traf1P39428 Gm25843-201ENSMUST00000122582 314 ntBASIC6.49□□□□□ -1.37
Traf1P39428 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC6.49□□□□□ -1.37
Traf1P39428 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC6.49□□□□□ -1.37
Traf1P39428 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Traf1P39428 Mir3110-201ENSMUST00000175053 80 ntBASIC6.49□□□□□ -1.37
Traf1P39428 Gm18969-201ENSMUST00000189423 730 ntBASIC6.49□□□□□ -1.37
Traf1P39428 Gm18183-201ENSMUST00000191024 615 ntBASIC6.49□□□□□ -1.37
Traf1P39428 Ighv6-2-201ENSMUST00000192430 295 ntBASIC6.49□□□□□ -1.37
Traf1P39428 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC6.49□□□□□ -1.37
Traf1P39428 Gm43554-201ENSMUST00000199987 186 ntBASIC6.49□□□□□ -1.37
Traf1P39428 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC6.49□□□□□ -1.37
Traf1P39428 Gm19596-201ENSMUST00000203685 739 ntBASIC6.49□□□□□ -1.37
Traf1P39428 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC6.49□□□□□ -1.37
Traf1P39428 Gm8291-201ENSMUST00000209635 1261 ntBASIC6.49□□□□□ -1.37
Traf1P39428 Gm20786-201ENSMUST00000212649 436 ntBASIC6.49□□□□□ -1.37
Traf1P39428 Gm18329-201ENSMUST00000215832 589 ntBASIC6.49□□□□□ -1.37
Traf1P39428 Gm19174-201ENSMUST00000216944 956 ntBASIC6.49□□□□□ -1.37
Traf1P39428 AC110381.1-201ENSMUST00000218987 586 ntBASIC6.49□□□□□ -1.37
Traf1P39428 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Traf1P39428 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC6.49□□□□□ -1.37
Traf1P39428 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Traf1P39428 Gm25682-201ENSMUST00000083942 164 ntBASIC6.49□□□□□ -1.37
Traf1P39428 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Traf1P39428 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Traf1P39428 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Traf1P39428 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Traf1P39428 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Traf1P39428 Naip3-201ENSMUST00000118082 4208 ntBASIC6.49□□□□□ -1.37
Traf1P39428 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Traf1P39428 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Traf1P39428 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Traf1P39428 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Traf1P39428 Gm45311-201ENSMUST00000211086 1330 ntBASIC6.49□□□□□ -1.37
Traf1P39428 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC6.49□□□□□ -1.37
Traf1P39428 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Traf1P39428 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC6.48□□□□□ -1.37
Traf1P39428 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Traf1P39428 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Traf1P39428 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Traf1P39428 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Traf1P39428 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.48□□□□□ -1.37
Traf1P39428 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Traf1P39428 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Traf1P39428 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Traf1P39428 Gm23750-201ENSMUST00000104222 132 ntBASIC6.48□□□□□ -1.37
Traf1P39428 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Traf1P39428 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC6.48□□□□□ -1.37
Traf1P39428 Gm11826-201ENSMUST00000118781 438 ntBASIC6.48□□□□□ -1.37
Traf1P39428 Gm12074-201ENSMUST00000120189 219 ntBASIC6.48□□□□□ -1.37
Traf1P39428 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Traf1P39428 Gm13259-201ENSMUST00000120792 456 ntBASIC6.48□□□□□ -1.37
Traf1P39428 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC6.48□□□□□ -1.37
Traf1P39428 Gm17044-201ENSMUST00000168549 828 ntBASIC6.48□□□□□ -1.37
Traf1P39428 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC6.48□□□□□ -1.37
Traf1P39428 Gm21959-201ENSMUST00000178439 452 ntBASIC6.48□□□□□ -1.37
Traf1P39428 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC6.48□□□□□ -1.37
Traf1P39428 Gm4832-201ENSMUST00000182679 399 ntBASIC6.48□□□□□ -1.37
Traf1P39428 Mir6539-201ENSMUST00000183732 110 ntBASIC6.48□□□□□ -1.37
Traf1P39428 Gm27985-201ENSMUST00000185112 378 ntBASIC6.48□□□□□ -1.37
Traf1P39428 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC6.48□□□□□ -1.37
Traf1P39428 Gm43078-201ENSMUST00000197222 168 ntBASIC6.48□□□□□ -1.37
Traf1P39428 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Traf1P39428 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC6.48□□□□□ -1.37
Traf1P39428 Gm7768-201ENSMUST00000222988 597 ntBASIC6.48□□□□□ -1.37
Traf1P39428 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
Traf1P39428 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Traf1P39428 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Traf1P39428 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Traf1P39428 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Traf1P39428 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Traf1P39428 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Traf1P39428 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms