Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC5.61□□□□□ -1.51
Lire1P11260 Gm28934-201ENSMUST00000186491 346 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC5.61□□□□□ -1.51
Lire1P11260 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lire1P11260 Gm37884-201ENSMUST00000191857 818 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Gm42753-201ENSMUST00000196718 1268 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Gm44234-201ENSMUST00000204246 900 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC5.61□□□□□ -1.51
Lire1P11260 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC5.61□□□□□ -1.51
Lire1P11260 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Lire1P11260 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Lire1P11260 Gm9321-201ENSMUST00000221179 778 ntBASIC5.61□□□□□ -1.51
Lire1P11260 AC164426.1-201ENSMUST00000225745 929 ntBASIC5.61□□□□□ -1.51
Lire1P11260 AC157572.4-201ENSMUST00000228203 549 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lire1P11260 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Lire1P11260 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Lire1P11260 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lire1P11260 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lire1P11260 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lire1P11260 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Gm42455-201ENSMUST00000199761 2736 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lire1P11260 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.6□□□□□ -1.51
Lire1P11260 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lire1P11260 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lire1P11260 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.6□□□□□ -1.51
Lire1P11260 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Lire1P11260 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Lire1P11260 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Lire1P11260 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Lire1P11260 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.6□□□□□ -1.51
Lire1P11260 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Lire1P11260 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lire1P11260 AC123629.1-201ENSMUST00000225669 1364 ntBASIC5.6□□□□□ -1.51
Lire1P11260 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lire1P11260 Gm23440-201ENSMUST00000104299 130 ntBASIC5.6□□□□□ -1.51
Lire1P11260 Gm13114-201ENSMUST00000117605 106 ntBASIC5.6□□□□□ -1.51
Lire1P11260 Gm11624-201ENSMUST00000118579 1041 ntBASIC5.6□□□□□ -1.51
Lire1P11260 Gm7189-201ENSMUST00000119811 429 ntBASIC5.6□□□□□ -1.51
Lire1P11260 Gm8317-201ENSMUST00000121261 471 ntBASIC5.6□□□□□ -1.51
Lire1P11260 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Lire1P11260 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC5.6□□□□□ -1.51
Lire1P11260 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.6□□□□□ -1.51
Lire1P11260 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC5.6□□□□□ -1.51
Lire1P11260 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC5.6□□□□□ -1.51
Lire1P11260 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.6□□□□□ -1.51
Lire1P11260 Gm5947-201ENSMUST00000179156 714 ntBASIC5.6□□□□□ -1.51
Lire1P11260 Gm5645-201ENSMUST00000179597 714 ntBASIC5.6□□□□□ -1.51
Lire1P11260 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lire1P11260 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC5.6□□□□□ -1.51
Lire1P11260 Gm27849-201ENSMUST00000183673 125 ntBASIC5.6□□□□□ -1.51
Lire1P11260 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC5.6□□□□□ -1.51
Lire1P11260 Mir7008-201ENSMUST00000184398 63 ntBASIC5.6□□□□□ -1.51
Lire1P11260 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
Lire1P11260 Gm44312-201ENSMUST00000203536 469 ntBASIC5.6□□□□□ -1.51
Lire1P11260 Gm44239-201ENSMUST00000204228 271 ntBASIC5.6□□□□□ -1.51
Lire1P11260 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC5.6□□□□□ -1.51
Lire1P11260 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lire1P11260 Olfr790-204ENSMUST00000218901 1070 ntBASIC5.6□□□□□ -1.51
Lire1P11260 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC5.6□□□□□ -1.51
Lire1P11260 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.6□□□□□ -1.51
Lire1P11260 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.6□□□□□ -1.51
Lire1P11260 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Lire1P11260 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Lire1P11260 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lire1P11260 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.6□□□□□ -1.51
Lire1P11260 Snora44-201ENSMUST00000082670 129 ntBASIC5.6□□□□□ -1.51
Lire1P11260 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Lire1P11260 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Lire1P11260 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Lire1P11260 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Lire1P11260 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lire1P11260 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Lire1P11260 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Lire1P11260 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.6□□□□□ -1.51
Lire1P11260 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lire1P11260 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lire1P11260 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Lire1P11260 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lire1P11260 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lire1P11260 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lire1P11260 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lire1P11260 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lire1P11260 AC140393.3-201ENSMUST00000228396 1352 ntBASIC5.59□□□□□ -1.51
Lire1P11260 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Lire1P11260 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lire1P11260 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Lire1P11260 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Lire1P11260 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
Lire1P11260 Gm11484-201ENSMUST00000119808 338 ntBASIC5.59□□□□□ -1.51
Lire1P11260 Gm7700-201ENSMUST00000120273 970 ntBASIC5.59□□□□□ -1.51
Lire1P11260 Gm14732-201ENSMUST00000121372 545 ntBASIC5.59□□□□□ -1.51
Lire1P11260 Gm15959-201ENSMUST00000121724 368 ntBASIC5.59□□□□□ -1.51
Lire1P11260 Gm14237-201ENSMUST00000122080 430 ntBASIC5.59□□□□□ -1.51
Lire1P11260 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Lire1P11260 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.59□□□□□ -1.51
Lire1P11260 Gm25150-201ENSMUST00000157121 60 ntBASIC5.59□□□□□ -1.51
Lire1P11260 Gm23467-201ENSMUST00000157127 159 ntBASIC5.59□□□□□ -1.51
Lire1P11260 Gm23894-201ENSMUST00000158107 313 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms