Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm29401-201ENSMUST00000186690 615 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm29178-204ENSMUST00000186784 615 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm28589-201ENSMUST00000186991 615 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm28936-201ENSMUST00000187153 615 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm29121-201ENSMUST00000187611 615 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm28243-201ENSMUST00000187801 615 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm28844-202ENSMUST00000187977 615 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm29058-201ENSMUST00000189510 615 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm5734-201ENSMUST00000189787 913 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm29624-201ENSMUST00000190018 615 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm28780-201ENSMUST00000190223 615 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm28969-211ENSMUST00000190992 615 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm28990-207ENSMUST00000191219 615 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm37503-201ENSMUST00000192088 319 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm36468-201ENSMUST00000192119 615 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm19231-201ENSMUST00000193212 830 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm31572-201ENSMUST00000193341 615 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm30175-201ENSMUST00000194173 615 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm30858-201ENSMUST00000195516 615 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm45874-201ENSMUST00000212423 346 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm45777-201ENSMUST00000213009 301 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm3800-201ENSMUST00000221086 554 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 AC192333.6-201ENSMUST00000224565 725 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 AC166574.3-201ENSMUST00000226725 367 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm26063-201ENSMUST00000083378 107 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm13590-201ENSMUST00000120183 1588 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Gm13121-201ENSMUST00000120637 632 ntBASIC5.87□□□□□ -1.47
Chmp6P0C0A3 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Gm25430-201ENSMUST00000157614 289 ntBASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Gm24940-201ENSMUST00000158326 108 ntBASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Esd-ps-201ENSMUST00000170684 847 ntBASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Gm23162-201ENSMUST00000175081 121 ntBASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Gm23806-201ENSMUST00000175157 109 ntBASIC5.87□□□□□ -1.47
Chmp6P0C0A3 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Gm8826-201ENSMUST00000193161 948 ntBASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Gm44673-201ENSMUST00000205692 996 ntBASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Gm45870-201ENSMUST00000211269 601 ntBASIC5.87□□□□□ -1.47
Chmp6P0C0A3 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.87□□□□□ -1.47
Chmp6P0C0A3 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Gm10064-201ENSMUST00000071235 399 ntBASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Gm14988-201ENSMUST00000117224 1548 ntBASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Chmp6P0C0A3 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Chmp6P0C0A3 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.86□□□□□ -1.47
Chmp6P0C0A3 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Chmp6P0C0A3 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Chmp6P0C0A3 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Chmp6P0C0A3 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
Chmp6P0C0A3 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.86□□□□□ -1.47
Chmp6P0C0A3 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC5.86□□□□□ -1.47
Chmp6P0C0A3 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Chmp6P0C0A3 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Chmp6P0C0A3 Gm4991-201ENSMUST00000118899 1552 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms