Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cldn5O54942 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC5.71□□□□□ -1.5
Cldn5O54942 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Cldn5O54942 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cldn5O54942 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cldn5O54942 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Cldn5O54942 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cldn5O54942 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Cldn5O54942 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cldn5O54942 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.7□□□□□ -1.5
Cldn5O54942 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cldn5O54942 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cldn5O54942 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cldn5O54942 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cldn5O54942 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5.7□□□□□ -1.5
Cldn5O54942 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
Cldn5O54942 Gm11369-201ENSMUST00000120812 318 ntBASIC5.7□□□□□ -1.5
Cldn5O54942 Gm15428-201ENSMUST00000121352 333 ntBASIC5.7□□□□□ -1.5
Cldn5O54942 Gm11804-201ENSMUST00000121663 468 ntBASIC5.7□□□□□ -1.5
Cldn5O54942 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC5.7□□□□□ -1.5
Cldn5O54942 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.7□□□□□ -1.5
Cldn5O54942 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cldn5O54942 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.7□□□□□ -1.5
Cldn5O54942 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC5.7□□□□□ -1.5
Cldn5O54942 Mir1963-201ENSMUST00000158594 59 ntBASIC5.7□□□□□ -1.5
Cldn5O54942 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.7□□□□□ -1.5
Cldn5O54942 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cldn5O54942 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC5.7□□□□□ -1.5
Cldn5O54942 Gm23806-201ENSMUST00000175157 109 ntBASIC5.7□□□□□ -1.5
Cldn5O54942 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.7□□□□□ -1.5
Cldn5O54942 Gm6223-201ENSMUST00000178436 871 ntBASIC5.7□□□□□ -1.5
Cldn5O54942 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC5.7□□□□□ -1.5
Cldn5O54942 Gm2325-201ENSMUST00000186637 581 ntBASIC5.7□□□□□ -1.5
Cldn5O54942 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC5.7□□□□□ -1.5
Cldn5O54942 Gm6137-201ENSMUST00000187552 578 ntBASIC5.7□□□□□ -1.5
Cldn5O54942 Gm5244-202ENSMUST00000189517 743 ntBASIC5.7□□□□□ -1.5
Cldn5O54942 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.7□□□□□ -1.5
Cldn5O54942 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cldn5O54942 Gm45700-201ENSMUST00000205866 347 ntBASIC5.7□□□□□ -1.5
Cldn5O54942 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.7□□□□□ -1.5
Cldn5O54942 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.7□□□□□ -1.5
Cldn5O54942 Gm19186-201ENSMUST00000219922 333 ntBASIC5.7□□□□□ -1.5
Cldn5O54942 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.7□□□□□ -1.5
Cldn5O54942 CT025552.1-201ENSMUST00000224561 521 ntBASIC5.7□□□□□ -1.5
Cldn5O54942 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cldn5O54942 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cldn5O54942 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cldn5O54942 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cldn5O54942 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Cldn5O54942 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cldn5O54942 Gm43319-201ENSMUST00000198036 2270 ntBASIC5.7□□□□□ -1.5
Cldn5O54942 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cldn5O54942 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cldn5O54942 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cldn5O54942 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cldn5O54942 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cldn5O54942 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cldn5O54942 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.7□□□□□ -1.5
Cldn5O54942 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC5.7□□□□□ -1.5
Cldn5O54942 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.7□□□□□ -1.5
Cldn5O54942 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cldn5O54942 Gm20644-201ENSMUST00000176721 2063 ntBASIC5.7□□□□□ -1.5
Cldn5O54942 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Cldn5O54942 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cldn5O54942 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cldn5O54942 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.69□□□□□ -1.5
Cldn5O54942 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.69□□□□□ -1.5
Cldn5O54942 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cldn5O54942 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cldn5O54942 Gm11447-201ENSMUST00000118983 858 ntBASIC5.69□□□□□ -1.5
Cldn5O54942 Gm14601-201ENSMUST00000120892 236 ntBASIC5.69□□□□□ -1.5
Cldn5O54942 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC5.69□□□□□ -1.5
Cldn5O54942 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Cldn5O54942 Gm11197-201ENSMUST00000145158 839 ntBASIC5.69□□□□□ -1.5
Cldn5O54942 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Cldn5O54942 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.69□□□□□ -1.5
Cldn5O54942 Gm25824-201ENSMUST00000157092 121 ntBASIC5.69□□□□□ -1.5
Cldn5O54942 Gm17223-201ENSMUST00000171413 481 ntBASIC5.69□□□□□ -1.5
Cldn5O54942 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.69□□□□□ -1.5
Cldn5O54942 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.69□□□□□ -1.5
Cldn5O54942 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cldn5O54942 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.69□□□□□ -1.5
Cldn5O54942 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.69□□□□□ -1.5
Cldn5O54942 Trbv27-201ENSMUST00000193711 277 ntBASIC5.69□□□□□ -1.5
Cldn5O54942 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.69□□□□□ -1.5
Cldn5O54942 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.69□□□□□ -1.5
Cldn5O54942 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.69□□□□□ -1.5
Cldn5O54942 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.69□□□□□ -1.5
Cldn5O54942 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Cldn5O54942 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.69□□□□□ -1.5
Cldn5O54942 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cldn5O54942 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cldn5O54942 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cldn5O54942 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.69□□□□□ -1.5
Cldn5O54942 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Cldn5O54942 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.69□□□□□ -1.5
Cldn5O54942 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.69□□□□□ -1.5
Cldn5O54942 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cldn5O54942 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cldn5O54942 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms