Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Hmgb3O54879 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Hmgb3O54879 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
Hmgb3O54879 Gm37781-201ENSMUST00000194773 3218 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Hmgb3O54879 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Hmgb3O54879 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.32□□□□□ -1.72
Hmgb3O54879 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Hmgb3O54879 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Hmgb3O54879 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Hmgb3O54879 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Hmgb3O54879 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Hmgb3O54879 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC4.32□□□□□ -1.72
Hmgb3O54879 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Hmgb3O54879 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Hmgb3O54879 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
Hmgb3O54879 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC4.32□□□□□ -1.72
Hmgb3O54879 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Hmgb3O54879 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Hmgb3O54879 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
Hmgb3O54879 Gm15332-201ENSMUST00000118386 357 ntBASIC4.32□□□□□ -1.72
Hmgb3O54879 Gm15335-201ENSMUST00000122442 411 ntBASIC4.32□□□□□ -1.72
Hmgb3O54879 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Hmgb3O54879 Gm25219-201ENSMUST00000157545 330 ntBASIC4.32□□□□□ -1.72
Hmgb3O54879 Gm23207-201ENSMUST00000158665 102 ntBASIC4.32□□□□□ -1.72
Hmgb3O54879 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC4.32□□□□□ -1.72
Hmgb3O54879 Gm20519-201ENSMUST00000173684 359 ntBASIC4.32□□□□□ -1.72
Hmgb3O54879 Gm7745-201ENSMUST00000182235 973 ntBASIC4.32□□□□□ -1.72
Hmgb3O54879 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Hmgb3O54879 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC4.32□□□□□ -1.72
Hmgb3O54879 Gm21803-201ENSMUST00000188897 693 ntBASIC4.32□□□□□ -1.72
Hmgb3O54879 Gm28567-201ENSMUST00000190270 693 ntBASIC4.32□□□□□ -1.72
Hmgb3O54879 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Hmgb3O54879 Gm37044-201ENSMUST00000193531 693 ntBASIC4.32□□□□□ -1.72
Hmgb3O54879 Gm38369-201ENSMUST00000195101 693 ntBASIC4.32□□□□□ -1.72
Hmgb3O54879 Gm43175-201ENSMUST00000198450 3810 ntBASIC4.32□□□□□ -1.72
Hmgb3O54879 Gm6261-201ENSMUST00000204707 760 ntBASIC4.32□□□□□ -1.72
Hmgb3O54879 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Hmgb3O54879 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC4.32□□□□□ -1.72
Hmgb3O54879 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC4.32□□□□□ -1.72
Hmgb3O54879 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Hmgb3O54879 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC4.32□□□□□ -1.72
Hmgb3O54879 Gm4263-201ENSMUST00000220693 1101 ntBASIC4.32□□□□□ -1.72
Hmgb3O54879 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC4.32□□□□□ -1.72
Hmgb3O54879 AC166369.2-201ENSMUST00000228403 308 ntBASIC4.32□□□□□ -1.72
Hmgb3O54879 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Hmgb3O54879 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Hmgb3O54879 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Hmgb3O54879 AC102847.2-201ENSMUST00000227799 2906 ntBASIC4.32□□□□□ -1.72
Hmgb3O54879 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Hmgb3O54879 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC4.32□□□□□ -1.72
Hmgb3O54879 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.32□□□□□ -1.72
Hmgb3O54879 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.32□□□□□ -1.72
Hmgb3O54879 Gm18163-201ENSMUST00000197877 1643 ntBASIC4.32□□□□□ -1.72
Hmgb3O54879 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Hmgb3O54879 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Hmgb3O54879 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Hmgb3O54879 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Hmgb3O54879 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Hmgb3O54879 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Hmgb3O54879 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC4.31□□□□□ -1.72
Hmgb3O54879 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmgb3O54879 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmgb3O54879 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC4.31□□□□□ -1.72
Hmgb3O54879 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Hmgb3O54879 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Hmgb3O54879 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Hmgb3O54879 n-R5s178-201ENSMUST00000104249 114 ntBASIC4.31□□□□□ -1.72
Hmgb3O54879 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Hmgb3O54879 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Hmgb3O54879 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmgb3O54879 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC4.31□□□□□ -1.72
Hmgb3O54879 Gm12939-201ENSMUST00000117303 165 ntBASIC4.31□□□□□ -1.72
Hmgb3O54879 Gm15754-201ENSMUST00000119191 478 ntBASIC4.31□□□□□ -1.72
Hmgb3O54879 Gm13924-201ENSMUST00000119899 486 ntBASIC4.31□□□□□ -1.72
Hmgb3O54879 Gm12618-201ENSMUST00000121754 483 ntBASIC4.31□□□□□ -1.72
Hmgb3O54879 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC4.31□□□□□ -1.72
Hmgb3O54879 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Hmgb3O54879 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmgb3O54879 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Hmgb3O54879 Gm22867-201ENSMUST00000157499 109 ntBASIC4.31□□□□□ -1.72
Hmgb3O54879 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC4.31□□□□□ -1.72
Hmgb3O54879 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC4.31□□□□□ -1.72
Hmgb3O54879 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC4.31□□□□□ -1.72
Hmgb3O54879 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Hmgb3O54879 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Hmgb3O54879 Mir6972-201ENSMUST00000184774 64 ntBASIC4.31□□□□□ -1.72
Hmgb3O54879 Gm27782-201ENSMUST00000185059 199 ntBASIC4.31□□□□□ -1.72
Hmgb3O54879 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmgb3O54879 Gm37024-201ENSMUST00000192224 868 ntBASIC4.31□□□□□ -1.72
Hmgb3O54879 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC4.31□□□□□ -1.72
Hmgb3O54879 Gm42708-201ENSMUST00000196332 905 ntBASIC4.31□□□□□ -1.72
Hmgb3O54879 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC4.31□□□□□ -1.72
Hmgb3O54879 Gm44432-201ENSMUST00000203342 938 ntBASIC4.31□□□□□ -1.72
Hmgb3O54879 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC4.31□□□□□ -1.72
Hmgb3O54879 Gm44538-201ENSMUST00000205615 348 ntBASIC4.31□□□□□ -1.72
Hmgb3O54879 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC4.31□□□□□ -1.72
Hmgb3O54879 AC069561.1-201ENSMUST00000213750 424 ntBASIC4.31□□□□□ -1.72
Hmgb3O54879 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC4.31□□□□□ -1.72
Hmgb3O54879 AC165347.1-201ENSMUST00000224089 1025 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 96.7 ms