Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.58□□□□□ -1.52
Col4a6B1AVK5 AC125539.2-201ENSMUST00000228339 753 ntBASIC5.58□□□□□ -1.52
Col4a6B1AVK5 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
Col4a6B1AVK5 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col4a6B1AVK5 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col4a6B1AVK5 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
Col4a6B1AVK5 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col4a6B1AVK5 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col4a6B1AVK5 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Col4a6B1AVK5 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Col4a6B1AVK5 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col4a6B1AVK5 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.58□□□□□ -1.52
Col4a6B1AVK5 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col4a6B1AVK5 Gm44843-201ENSMUST00000208320 1396 ntBASIC5.58□□□□□ -1.52
Col4a6B1AVK5 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.58□□□□□ -1.52
Col4a6B1AVK5 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col4a6B1AVK5 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Col4a6B1AVK5 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col4a6B1AVK5 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col4a6B1AVK5 Gm15168-201ENSMUST00000121057 316 ntBASIC5.57□□□□□ -1.52
Col4a6B1AVK5 Gm16254-201ENSMUST00000131528 730 ntBASIC5.57□□□□□ -1.52
Col4a6B1AVK5 Gm24186-201ENSMUST00000157983 127 ntBASIC5.57□□□□□ -1.52
Col4a6B1AVK5 Gm22569-201ENSMUST00000175545 124 ntBASIC5.57□□□□□ -1.52
Col4a6B1AVK5 Gm6717-201ENSMUST00000185549 838 ntBASIC5.57□□□□□ -1.52
Col4a6B1AVK5 Gm36986-201ENSMUST00000195320 353 ntBASIC5.57□□□□□ -1.52
Col4a6B1AVK5 Gm7128-201ENSMUST00000211639 533 ntBASIC5.57□□□□□ -1.52
Col4a6B1AVK5 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.57□□□□□ -1.52
Col4a6B1AVK5 CT954323.2-201ENSMUST00000222056 213 ntBASIC5.57□□□□□ -1.52
Col4a6B1AVK5 CT030194.1-201ENSMUST00000225507 532 ntBASIC5.57□□□□□ -1.52
Col4a6B1AVK5 Gm24763-201ENSMUST00000083688 190 ntBASIC5.57□□□□□ -1.52
Col4a6B1AVK5 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.57□□□□□ -1.52
Col4a6B1AVK5 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
Col4a6B1AVK5 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col4a6B1AVK5 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col4a6B1AVK5 Gm43395-201ENSMUST00000198717 2240 ntBASIC5.57□□□□□ -1.52
Col4a6B1AVK5 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.57□□□□□ -1.52
Col4a6B1AVK5 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col4a6B1AVK5 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Col4a6B1AVK5 AC134860.3-201ENSMUST00000223564 1300 ntBASIC5.57□□□□□ -1.52
Col4a6B1AVK5 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.57□□□□□ -1.52
Col4a6B1AVK5 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col4a6B1AVK5 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col4a6B1AVK5 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col4a6B1AVK5 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Col4a6B1AVK5 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col4a6B1AVK5 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.57□□□□□ -1.52
Col4a6B1AVK5 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Gm11878-201ENSMUST00000117908 400 ntBASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Gm28097-201ENSMUST00000187333 366 ntBASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Gm37491-201ENSMUST00000192552 1111 ntBASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Gm37908-201ENSMUST00000195828 470 ntBASIC5.56□□□□□ -1.52
Col4a6B1AVK5 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Gm3189-201ENSMUST00000205595 832 ntBASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Gm7040-201ENSMUST00000223271 443 ntBASIC5.56□□□□□ -1.52
Col4a6B1AVK5 AC164597.1-201ENSMUST00000226538 514 ntBASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Gm22350-201ENSMUST00000083924 156 ntBASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.56□□□□□ -1.52
Col4a6B1AVK5 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Gm42528-201ENSMUST00000200697 3418 ntBASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Gm16082-201ENSMUST00000115992 377 ntBASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Gm11910-201ENSMUST00000121624 432 ntBASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Gm3362-201ENSMUST00000148102 466 ntBASIC5.56□□□□□ -1.52
Col4a6B1AVK5 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Gm4845-201ENSMUST00000179202 562 ntBASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Gm9687-201ENSMUST00000189312 602 ntBASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Mir6516-201ENSMUST00000196236 110 ntBASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Gm44074-201ENSMUST00000204562 337 ntBASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Gm8264-201ENSMUST00000217801 465 ntBASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Gm8158-201ENSMUST00000219220 465 ntBASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Gm8112-201ENSMUST00000219637 465 ntBASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col4a6B1AVK5 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC5.55□□□□□ -1.52
Col4a6B1AVK5 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Col4a6B1AVK5 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col4a6B1AVK5 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Col4a6B1AVK5 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col4a6B1AVK5 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.55□□□□□ -1.52
Col4a6B1AVK5 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col4a6B1AVK5 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms