Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Gm5809-201ENSMUST00000121854 529 ntBASIC4.54□□□□□ -1.68
Col6a4A2AX52 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Gm24692-201ENSMUST00000157761 146 ntBASIC4.54□□□□□ -1.68
Col6a4A2AX52 Gm17121-201ENSMUST00000170414 847 ntBASIC4.54□□□□□ -1.68
Col6a4A2AX52 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Gm17222-201ENSMUST00000180135 847 ntBASIC4.54□□□□□ -1.68
Col6a4A2AX52 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC4.54□□□□□ -1.68
Col6a4A2AX52 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Gm9038-201ENSMUST00000203400 604 ntBASIC4.54□□□□□ -1.68
Col6a4A2AX52 Gm45700-201ENSMUST00000205866 347 ntBASIC4.54□□□□□ -1.68
Col6a4A2AX52 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Gm17994-201ENSMUST00000209260 533 ntBASIC4.54□□□□□ -1.68
Col6a4A2AX52 Gm29785-201ENSMUST00000217033 383 ntBASIC4.54□□□□□ -1.68
Col6a4A2AX52 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Col6a4A2AX52 AC139350.2-201ENSMUST00000226508 2331 ntBASIC4.54□□□□□ -1.68
Col6a4A2AX52 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Gm43891-201ENSMUST00000205132 3112 ntBASIC4.54□□□□□ -1.68
Col6a4A2AX52 Gm23274-201ENSMUST00000104056 130 ntBASIC4.54□□□□□ -1.68
Col6a4A2AX52 Gm12285-201ENSMUST00000117347 233 ntBASIC4.54□□□□□ -1.68
Col6a4A2AX52 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC4.54□□□□□ -1.68
Col6a4A2AX52 Gm12237-201ENSMUST00000120158 470 ntBASIC4.54□□□□□ -1.68
Col6a4A2AX52 Gm13363-201ENSMUST00000122008 522 ntBASIC4.54□□□□□ -1.68
Col6a4A2AX52 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC4.54□□□□□ -1.68
Col6a4A2AX52 Gm16571-201ENSMUST00000159112 291 ntBASIC4.54□□□□□ -1.68
Col6a4A2AX52 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Col6a4A2AX52 Gm19206-201ENSMUST00000186401 827 ntBASIC4.54□□□□□ -1.68
Col6a4A2AX52 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a4A2AX52 AC165953.1-201ENSMUST00000226386 357 ntBASIC4.54□□□□□ -1.68
Col6a4A2AX52 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.54□□□□□ -1.68
Col6a4A2AX52 AC125539.2-201ENSMUST00000228339 753 ntBASIC4.54□□□□□ -1.68
Col6a4A2AX52 Gm6863-201ENSMUST00000052882 636 ntBASIC4.54□□□□□ -1.68
Col6a4A2AX52 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Gm42613-201ENSMUST00000199975 1931 ntBASIC4.53□□□□□ -1.68
Col6a4A2AX52 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a4A2AX52 AC163731.1-201ENSMUST00000225696 3118 ntBASIC4.53□□□□□ -1.68
Col6a4A2AX52 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a4A2AX52 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.53□□□□□ -1.68
Col6a4A2AX52 V1rg10-201ENSMUST00000183378 937 ntBASIC4.53□□□□□ -1.68
Col6a4A2AX52 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC4.53□□□□□ -1.68
Col6a4A2AX52 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.53□□□□□ -1.68
Col6a4A2AX52 CT025689.2-201ENSMUST00000224979 429 ntBASIC4.53□□□□□ -1.68
Col6a4A2AX52 AC139758.1-201ENSMUST00000226573 930 ntBASIC4.53□□□□□ -1.68
Col6a4A2AX52 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Col6a4A2AX52 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC4.53□□□□□ -1.68
Col6a4A2AX52 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a4A2AX52 Gm37106-201ENSMUST00000193760 1532 ntBASIC4.53□□□□□ -1.69
Col6a4A2AX52 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col6a4A2AX52 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms