Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
Scn3aA2ASI5 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC5.98□□□□□ -1.45
Scn3aA2ASI5 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
Scn3aA2ASI5 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Scn3aA2ASI5 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Scn3aA2ASI5 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
Scn3aA2ASI5 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.98□□□□□ -1.45
Scn3aA2ASI5 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC5.98□□□□□ -1.45
Scn3aA2ASI5 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Scn3aA2ASI5 Gm25019-201ENSMUST00000179732 110 ntBASIC5.98□□□□□ -1.45
Scn3aA2ASI5 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.98□□□□□ -1.45
Scn3aA2ASI5 Gm2147-201ENSMUST00000193588 639 ntBASIC5.98□□□□□ -1.45
Scn3aA2ASI5 Gm44281-201ENSMUST00000203090 166 ntBASIC5.98□□□□□ -1.45
Scn3aA2ASI5 Gm44214-201ENSMUST00000204153 606 ntBASIC5.98□□□□□ -1.45
Scn3aA2ASI5 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.98□□□□□ -1.45
Scn3aA2ASI5 Gm45731-201ENSMUST00000211988 1203 ntBASIC5.98□□□□□ -1.45
Scn3aA2ASI5 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.98□□□□□ -1.45
Scn3aA2ASI5 Gm5457-201ENSMUST00000022260 333 ntBASIC5.98□□□□□ -1.45
Scn3aA2ASI5 AC124549.1-201ENSMUST00000225912 333 ntBASIC5.98□□□□□ -1.45
Scn3aA2ASI5 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Scn3aA2ASI5 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Scn3aA2ASI5 Gm37033-201ENSMUST00000193199 7350 ntBASIC5.98□□□□□ -1.45
Scn3aA2ASI5 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Scn3aA2ASI5 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.98□□□□□ -1.45
Scn3aA2ASI5 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Scn3aA2ASI5 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Scn3aA2ASI5 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Scn3aA2ASI5 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Scn3aA2ASI5 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.98□□□□□ -1.45
Scn3aA2ASI5 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.98□□□□□ -1.45
Scn3aA2ASI5 Gm23593-201ENSMUST00000104309 120 ntBASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Gm14995-201ENSMUST00000117135 391 ntBASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Gm12287-201ENSMUST00000119770 707 ntBASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Gm12413-201ENSMUST00000121508 312 ntBASIC5.97□□□□□ -1.45
Scn3aA2ASI5 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Gm2950-201ENSMUST00000185530 520 ntBASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Gm28353-201ENSMUST00000186482 570 ntBASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Gm28533-201ENSMUST00000186741 570 ntBASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Gm43712-201ENSMUST00000198020 291 ntBASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Gm42502-201ENSMUST00000198550 1089 ntBASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Gm4822-201ENSMUST00000077551 479 ntBASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC5.97□□□□□ -1.45
Scn3aA2ASI5 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Scn3aA2ASI5 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Scn3aA2ASI5 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
Scn3aA2ASI5 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Scn3aA2ASI5 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Scn3aA2ASI5 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.45
Scn3aA2ASI5 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.96□□□□□ -1.45
Scn3aA2ASI5 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Scn3aA2ASI5 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Scn3aA2ASI5 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Scn3aA2ASI5 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.96□□□□□ -1.46
Scn3aA2ASI5 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Scn3aA2ASI5 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Scn3aA2ASI5 Gm11699-201ENSMUST00000119016 401 ntBASIC5.96□□□□□ -1.46
Scn3aA2ASI5 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.96□□□□□ -1.46
Scn3aA2ASI5 n-R5s98-201ENSMUST00000122549 119 ntBASIC5.96□□□□□ -1.46
Scn3aA2ASI5 Gm22870-201ENSMUST00000157501 112 ntBASIC5.96□□□□□ -1.46
Scn3aA2ASI5 Gm23354-201ENSMUST00000158426 104 ntBASIC5.96□□□□□ -1.46
Scn3aA2ASI5 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.96□□□□□ -1.46
Scn3aA2ASI5 Gm26318-201ENSMUST00000176507 96 ntBASIC5.96□□□□□ -1.46
Scn3aA2ASI5 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.96□□□□□ -1.46
Scn3aA2ASI5 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Scn3aA2ASI5 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms