Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
H2afb2S4R1M3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
H2afb2S4R1M3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
H2afb2S4R1M3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.84■□□□□ 0.45
H2afb2S4R1M3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
H2afb2S4R1M3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
H2afb2S4R1M3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
H2afb2S4R1M3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
H2afb2S4R1M3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
H2afb2S4R1M3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.84■□□□□ 0.45
H2afb2S4R1M3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
H2afb2S4R1M3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
H2afb2S4R1M3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
H2afb2S4R1M3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
H2afb2S4R1M3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
H2afb2S4R1M3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
H2afb2S4R1M3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
H2afb2S4R1M3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
H2afb2S4R1M3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
H2afb2S4R1M3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
H2afb2S4R1M3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
H2afb2S4R1M3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.83■□□□□ 0.45
H2afb2S4R1M3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
H2afb2S4R1M3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
H2afb2S4R1M3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
H2afb2S4R1M3 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.83■□□□□ 0.44
H2afb2S4R1M3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
H2afb2S4R1M3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.83■□□□□ 0.44
H2afb2S4R1M3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.83■□□□□ 0.44
H2afb2S4R1M3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
H2afb2S4R1M3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
H2afb2S4R1M3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
H2afb2S4R1M3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
H2afb2S4R1M3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
H2afb2S4R1M3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
H2afb2S4R1M3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.83■□□□□ 0.44
H2afb2S4R1M3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
H2afb2S4R1M3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
H2afb2S4R1M3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb2S4R1M3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb2S4R1M3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb2S4R1M3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb2S4R1M3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb2S4R1M3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
H2afb2S4R1M3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb2S4R1M3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
H2afb2S4R1M3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb2S4R1M3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb2S4R1M3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb2S4R1M3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb2S4R1M3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb2S4R1M3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb2S4R1M3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb2S4R1M3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb2S4R1M3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb2S4R1M3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2afb2S4R1M3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2afb2S4R1M3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
H2afb2S4R1M3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
H2afb2S4R1M3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.81■□□□□ 0.44
H2afb2S4R1M3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2afb2S4R1M3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2afb2S4R1M3 Gm11927-201ENSMUST00000118472 759 ntBASIC17.81■□□□□ 0.44
H2afb2S4R1M3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.81■□□□□ 0.44
H2afb2S4R1M3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
H2afb2S4R1M3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
H2afb2S4R1M3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2afb2S4R1M3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
H2afb2S4R1M3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2afb2S4R1M3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2afb2S4R1M3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
H2afb2S4R1M3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2afb2S4R1M3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2afb2S4R1M3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2afb2S4R1M3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2afb2S4R1M3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2afb2S4R1M3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
H2afb2S4R1M3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2afb2S4R1M3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.8■□□□□ 0.44
H2afb2S4R1M3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.8■□□□□ 0.44
H2afb2S4R1M3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
H2afb2S4R1M3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
H2afb2S4R1M3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb2S4R1M3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb2S4R1M3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
H2afb2S4R1M3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb2S4R1M3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb2S4R1M3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb2S4R1M3 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.79■□□□□ 0.44
H2afb2S4R1M3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb2S4R1M3 Gm2559-201ENSMUST00000201323 363 ntBASIC17.79■□□□□ 0.44
H2afb2S4R1M3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb2S4R1M3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb2S4R1M3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb2S4R1M3 Idnk-204ENSMUST00000226010 1898 ntBASIC17.79■□□□□ 0.44
H2afb2S4R1M3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb2S4R1M3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb2S4R1M3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb2S4R1M3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb2S4R1M3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms