Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmg20bQ9Z104 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Hmg20bQ9Z104 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmg20bQ9Z104 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmg20bQ9Z104 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmg20bQ9Z104 Gm20049-201ENSMUST00000219950 730 ntBASIC21.02■□□□□ 0.96
Hmg20bQ9Z104 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmg20bQ9Z104 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmg20bQ9Z104 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC21.02■□□□□ 0.96
Hmg20bQ9Z104 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Hmg20bQ9Z104 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmg20bQ9Z104 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmg20bQ9Z104 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmg20bQ9Z104 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Hmg20bQ9Z104 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmg20bQ9Z104 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmg20bQ9Z104 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmg20bQ9Z104 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Hmg20bQ9Z104 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmg20bQ9Z104 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.01■□□□□ 0.95
Hmg20bQ9Z104 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.01■□□□□ 0.95
Hmg20bQ9Z104 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmg20bQ9Z104 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Hmg20bQ9Z104 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmg20bQ9Z104 Gm37811-201ENSMUST00000192416 2601 ntBASIC21.01■□□□□ 0.95
Hmg20bQ9Z104 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.01■□□□□ 0.95
Hmg20bQ9Z104 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmg20bQ9Z104 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmg20bQ9Z104 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmg20bQ9Z104 Zcchc6-207ENSMUST00000225576 2499 ntBASIC21■□□□□ 0.95
Hmg20bQ9Z104 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmg20bQ9Z104 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hmg20bQ9Z104 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Hmg20bQ9Z104 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
Hmg20bQ9Z104 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hmg20bQ9Z104 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC21■□□□□ 0.95
Hmg20bQ9Z104 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Hmg20bQ9Z104 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmg20bQ9Z104 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Hmg20bQ9Z104 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmg20bQ9Z104 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmg20bQ9Z104 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmg20bQ9Z104 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmg20bQ9Z104 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Hmg20bQ9Z104 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.99■□□□□ 0.95
Hmg20bQ9Z104 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.99■□□□□ 0.95
Hmg20bQ9Z104 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Hmg20bQ9Z104 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmg20bQ9Z104 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmg20bQ9Z104 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmg20bQ9Z104 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmg20bQ9Z104 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmg20bQ9Z104 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hmg20bQ9Z104 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.98■□□□□ 0.95
Hmg20bQ9Z104 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmg20bQ9Z104 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Hmg20bQ9Z104 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmg20bQ9Z104 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hmg20bQ9Z104 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.98■□□□□ 0.95
Hmg20bQ9Z104 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmg20bQ9Z104 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmg20bQ9Z104 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hmg20bQ9Z104 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.98■□□□□ 0.95
Hmg20bQ9Z104 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hmg20bQ9Z104 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmg20bQ9Z104 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmg20bQ9Z104 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmg20bQ9Z104 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmg20bQ9Z104 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmg20bQ9Z104 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
Hmg20bQ9Z104 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Hmg20bQ9Z104 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.97■□□□□ 0.95
Hmg20bQ9Z104 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmg20bQ9Z104 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmg20bQ9Z104 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.97■□□□□ 0.95
Hmg20bQ9Z104 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmg20bQ9Z104 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmg20bQ9Z104 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmg20bQ9Z104 Gm15375-201ENSMUST00000119510 849 ntBASIC20.97■□□□□ 0.95
Hmg20bQ9Z104 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.97■□□□□ 0.95
Hmg20bQ9Z104 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hmg20bQ9Z104 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.97■□□□□ 0.95
Hmg20bQ9Z104 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmg20bQ9Z104 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmg20bQ9Z104 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmg20bQ9Z104 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmg20bQ9Z104 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmg20bQ9Z104 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmg20bQ9Z104 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmg20bQ9Z104 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmg20bQ9Z104 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.96■□□□□ 0.95
Hmg20bQ9Z104 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.96■□□□□ 0.95
Hmg20bQ9Z104 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmg20bQ9Z104 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hmg20bQ9Z104 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.96■□□□□ 0.95
Hmg20bQ9Z104 Gm27275-201ENSMUST00000184318 272 ntBASIC20.96■□□□□ 0.95
Hmg20bQ9Z104 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmg20bQ9Z104 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmg20bQ9Z104 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmg20bQ9Z104 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms