Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Atp6ap1Q9R1Q9 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 Gm27275-201ENSMUST00000184318 272 ntBASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 Mtag2-201ENSMUST00000058665 714 ntBASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp6ap1Q9R1Q9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atp6ap1Q9R1Q9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atp6ap1Q9R1Q9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atp6ap1Q9R1Q9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Atp6ap1Q9R1Q9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Atp6ap1Q9R1Q9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Atp6ap1Q9R1Q9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atp6ap1Q9R1Q9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atp6ap1Q9R1Q9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atp6ap1Q9R1Q9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atp6ap1Q9R1Q9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atp6ap1Q9R1Q9 Gm11249-201ENSMUST00000117071 859 ntBASIC17.43■□□□□ 0.38
Atp6ap1Q9R1Q9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Atp6ap1Q9R1Q9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atp6ap1Q9R1Q9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.43■□□□□ 0.38
Atp6ap1Q9R1Q9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atp6ap1Q9R1Q9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atp6ap1Q9R1Q9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atp6ap1Q9R1Q9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Atp6ap1Q9R1Q9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atp6ap1Q9R1Q9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atp6ap1Q9R1Q9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atp6ap1Q9R1Q9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atp6ap1Q9R1Q9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Atp6ap1Q9R1Q9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atp6ap1Q9R1Q9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atp6ap1Q9R1Q9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atp6ap1Q9R1Q9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atp6ap1Q9R1Q9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.42■□□□□ 0.38
Atp6ap1Q9R1Q9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atp6ap1Q9R1Q9 Gm12527-201ENSMUST00000117967 564 ntBASIC17.42■□□□□ 0.38
Atp6ap1Q9R1Q9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Atp6ap1Q9R1Q9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Atp6ap1Q9R1Q9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atp6ap1Q9R1Q9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atp6ap1Q9R1Q9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atp6ap1Q9R1Q9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atp6ap1Q9R1Q9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atp6ap1Q9R1Q9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atp6ap1Q9R1Q9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atp6ap1Q9R1Q9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atp6ap1Q9R1Q9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atp6ap1Q9R1Q9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Atp6ap1Q9R1Q9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atp6ap1Q9R1Q9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Atp6ap1Q9R1Q9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atp6ap1Q9R1Q9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atp6ap1Q9R1Q9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Atp6ap1Q9R1Q9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.41■□□□□ 0.38
Atp6ap1Q9R1Q9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atp6ap1Q9R1Q9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atp6ap1Q9R1Q9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atp6ap1Q9R1Q9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atp6ap1Q9R1Q9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atp6ap1Q9R1Q9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Atp6ap1Q9R1Q9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atp6ap1Q9R1Q9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Atp6ap1Q9R1Q9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atp6ap1Q9R1Q9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atp6ap1Q9R1Q9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atp6ap1Q9R1Q9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Atp6ap1Q9R1Q9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.4■□□□□ 0.38
Atp6ap1Q9R1Q9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Atp6ap1Q9R1Q9 Gm37856-201ENSMUST00000191634 999 ntBASIC17.4■□□□□ 0.38
Atp6ap1Q9R1Q9 Trmt13-210ENSMUST00000198454 880 ntBASIC17.4■□□□□ 0.38
Atp6ap1Q9R1Q9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Atp6ap1Q9R1Q9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Atp6ap1Q9R1Q9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Atp6ap1Q9R1Q9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atp6ap1Q9R1Q9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atp6ap1Q9R1Q9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atp6ap1Q9R1Q9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Atp6ap1Q9R1Q9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms