Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm4Q9QXA5 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.09□□□□□ -0.15
Lsm4Q9QXA5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Lsm4Q9QXA5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.09□□□□□ -0.15
Lsm4Q9QXA5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.09□□□□□ -0.15
Lsm4Q9QXA5 Gm43017-201ENSMUST00000198296 752 ntBASIC14.09□□□□□ -0.15
Lsm4Q9QXA5 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Lsm4Q9QXA5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Lsm4Q9QXA5 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.09□□□□□ -0.15
Lsm4Q9QXA5 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.09□□□□□ -0.15
Lsm4Q9QXA5 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm4Q9QXA5 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm4Q9QXA5 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm4Q9QXA5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm4Q9QXA5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lsm4Q9QXA5 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lsm4Q9QXA5 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
Lsm4Q9QXA5 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.08□□□□□ -0.15
Lsm4Q9QXA5 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Lsm4Q9QXA5 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Lsm4Q9QXA5 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lsm4Q9QXA5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.08□□□□□ -0.16
Lsm4Q9QXA5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm4Q9QXA5 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm4Q9QXA5 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm4Q9QXA5 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm4Q9QXA5 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm4Q9QXA5 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm4Q9QXA5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm4Q9QXA5 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm4Q9QXA5 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Lsm4Q9QXA5 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm4Q9QXA5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm4Q9QXA5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Lsm4Q9QXA5 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm4Q9QXA5 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm4Q9QXA5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm4Q9QXA5 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm4Q9QXA5 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm4Q9QXA5 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm4Q9QXA5 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm4Q9QXA5 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm4Q9QXA5 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm4Q9QXA5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm4Q9QXA5 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Lsm4Q9QXA5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm4Q9QXA5 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm4Q9QXA5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm4Q9QXA5 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.07□□□□□ -0.16
Lsm4Q9QXA5 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Lsm4Q9QXA5 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm4Q9QXA5 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm4Q9QXA5 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm4Q9QXA5 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lsm4Q9QXA5 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Lsm4Q9QXA5 Reep4-203ENSMUST00000226563 1444 ntBASIC14.07□□□□□ -0.16
Lsm4Q9QXA5 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Lsm4Q9QXA5 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm4Q9QXA5 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm4Q9QXA5 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm4Q9QXA5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm4Q9QXA5 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm4Q9QXA5 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.06□□□□□ -0.16
Lsm4Q9QXA5 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.06□□□□□ -0.16
Lsm4Q9QXA5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm4Q9QXA5 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm4Q9QXA5 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm4Q9QXA5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm4Q9QXA5 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Lsm4Q9QXA5 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm4Q9QXA5 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm4Q9QXA5 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Lsm4Q9QXA5 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm4Q9QXA5 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm4Q9QXA5 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm4Q9QXA5 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Lsm4Q9QXA5 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm4Q9QXA5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm4Q9QXA5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm4Q9QXA5 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Lsm4Q9QXA5 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm4Q9QXA5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm4Q9QXA5 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.05□□□□□ -0.16
Lsm4Q9QXA5 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.05□□□□□ -0.16
Lsm4Q9QXA5 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm4Q9QXA5 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm4Q9QXA5 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm4Q9QXA5 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm4Q9QXA5 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm4Q9QXA5 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm4Q9QXA5 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Lsm4Q9QXA5 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.05□□□□□ -0.16
Lsm4Q9QXA5 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm4Q9QXA5 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm4Q9QXA5 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm4Q9QXA5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm4Q9QXA5 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm4Q9QXA5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm4Q9QXA5 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm4Q9QXA5 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms