Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx5Q9JL61 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx5Q9JL61 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx5Q9JL61 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx5Q9JL61 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx5Q9JL61 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx5Q9JL61 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rfx5Q9JL61 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx5Q9JL61 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx5Q9JL61 Gm29791-202ENSMUST00000207888 369 ntBASIC18.85■□□□□ 0.61
Rfx5Q9JL61 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx5Q9JL61 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx5Q9JL61 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx5Q9JL61 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx5Q9JL61 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx5Q9JL61 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx5Q9JL61 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx5Q9JL61 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rfx5Q9JL61 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx5Q9JL61 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx5Q9JL61 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.84■□□□□ 0.61
Rfx5Q9JL61 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx5Q9JL61 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.84■□□□□ 0.61
Rfx5Q9JL61 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx5Q9JL61 Gm6576-201ENSMUST00000169678 883 ntBASIC18.84■□□□□ 0.61
Rfx5Q9JL61 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.84■□□□□ 0.61
Rfx5Q9JL61 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx5Q9JL61 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx5Q9JL61 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx5Q9JL61 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx5Q9JL61 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.84■□□□□ 0.61
Rfx5Q9JL61 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx5Q9JL61 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx5Q9JL61 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx5Q9JL61 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfx5Q9JL61 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfx5Q9JL61 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfx5Q9JL61 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
Rfx5Q9JL61 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rfx5Q9JL61 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfx5Q9JL61 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.83■□□□□ 0.6
Rfx5Q9JL61 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.83■□□□□ 0.6
Rfx5Q9JL61 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx5Q9JL61 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx5Q9JL61 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx5Q9JL61 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx5Q9JL61 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx5Q9JL61 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx5Q9JL61 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx5Q9JL61 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx5Q9JL61 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.82■□□□□ 0.6
Rfx5Q9JL61 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.82■□□□□ 0.6
Rfx5Q9JL61 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx5Q9JL61 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rfx5Q9JL61 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx5Q9JL61 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx5Q9JL61 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx5Q9JL61 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx5Q9JL61 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx5Q9JL61 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx5Q9JL61 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx5Q9JL61 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rfx5Q9JL61 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx5Q9JL61 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.81■□□□□ 0.6
Rfx5Q9JL61 Mir1199-201ENSMUST00000117015 119 ntBASIC18.81■□□□□ 0.6
Rfx5Q9JL61 Gm12382-201ENSMUST00000122005 922 ntBASIC18.81■□□□□ 0.6
Rfx5Q9JL61 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.81■□□□□ 0.6
Rfx5Q9JL61 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx5Q9JL61 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx5Q9JL61 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx5Q9JL61 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rfx5Q9JL61 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx5Q9JL61 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rfx5Q9JL61 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx5Q9JL61 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.81■□□□□ 0.6
Rfx5Q9JL61 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx5Q9JL61 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rfx5Q9JL61 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rfx5Q9JL61 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx5Q9JL61 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx5Q9JL61 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
Rfx5Q9JL61 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx5Q9JL61 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rfx5Q9JL61 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.8■□□□□ 0.6
Rfx5Q9JL61 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx5Q9JL61 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx5Q9JL61 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Rfx5Q9JL61 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx5Q9JL61 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx5Q9JL61 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx5Q9JL61 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx5Q9JL61 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx5Q9JL61 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx5Q9JL61 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx5Q9JL61 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.8■□□□□ 0.6
Rfx5Q9JL61 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx5Q9JL61 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx5Q9JL61 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rfx5Q9JL61 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Rfx5Q9JL61 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms