Protein–RNA interactions for Protein: Q9ESJ4

Nckipsd, NCK-interacting protein with SH3 domain, mousemouse

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NckipsdQ9ESJ4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NckipsdQ9ESJ4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NckipsdQ9ESJ4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NckipsdQ9ESJ4 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NckipsdQ9ESJ4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NckipsdQ9ESJ4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NckipsdQ9ESJ4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NckipsdQ9ESJ4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NckipsdQ9ESJ4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.53■□□□□ 0.56
NckipsdQ9ESJ4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NckipsdQ9ESJ4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NckipsdQ9ESJ4 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NckipsdQ9ESJ4 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NckipsdQ9ESJ4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NckipsdQ9ESJ4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NckipsdQ9ESJ4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NckipsdQ9ESJ4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NckipsdQ9ESJ4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NckipsdQ9ESJ4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
NckipsdQ9ESJ4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NckipsdQ9ESJ4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NckipsdQ9ESJ4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NckipsdQ9ESJ4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
NckipsdQ9ESJ4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.52■□□□□ 0.56
NckipsdQ9ESJ4 Gm7889-201ENSMUST00000185591 958 ntBASIC18.52■□□□□ 0.56
NckipsdQ9ESJ4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NckipsdQ9ESJ4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NckipsdQ9ESJ4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
NckipsdQ9ESJ4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NckipsdQ9ESJ4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NckipsdQ9ESJ4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
NckipsdQ9ESJ4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NckipsdQ9ESJ4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NckipsdQ9ESJ4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NckipsdQ9ESJ4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NckipsdQ9ESJ4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.51■□□□□ 0.55
NckipsdQ9ESJ4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NckipsdQ9ESJ4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NckipsdQ9ESJ4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NckipsdQ9ESJ4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.51■□□□□ 0.55
NckipsdQ9ESJ4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NckipsdQ9ESJ4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
NckipsdQ9ESJ4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NckipsdQ9ESJ4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NckipsdQ9ESJ4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NckipsdQ9ESJ4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NckipsdQ9ESJ4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
NckipsdQ9ESJ4 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.5■□□□□ 0.55
NckipsdQ9ESJ4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NckipsdQ9ESJ4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NckipsdQ9ESJ4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NckipsdQ9ESJ4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.5■□□□□ 0.55
NckipsdQ9ESJ4 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.5■□□□□ 0.55
NckipsdQ9ESJ4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NckipsdQ9ESJ4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NckipsdQ9ESJ4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NckipsdQ9ESJ4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NckipsdQ9ESJ4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NckipsdQ9ESJ4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NckipsdQ9ESJ4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.49■□□□□ 0.55
NckipsdQ9ESJ4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NckipsdQ9ESJ4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.49■□□□□ 0.55
NckipsdQ9ESJ4 Gm4974-201ENSMUST00000209974 875 ntBASIC18.49■□□□□ 0.55
NckipsdQ9ESJ4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.49■□□□□ 0.55
NckipsdQ9ESJ4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NckipsdQ9ESJ4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NckipsdQ9ESJ4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
NckipsdQ9ESJ4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.49■□□□□ 0.55
NckipsdQ9ESJ4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NckipsdQ9ESJ4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
NckipsdQ9ESJ4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NckipsdQ9ESJ4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NckipsdQ9ESJ4 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.48■□□□□ 0.55
NckipsdQ9ESJ4 Gm10418-201ENSMUST00000100943 576 ntBASIC18.48■□□□□ 0.55
NckipsdQ9ESJ4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NckipsdQ9ESJ4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NckipsdQ9ESJ4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NckipsdQ9ESJ4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.48■□□□□ 0.55
NckipsdQ9ESJ4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NckipsdQ9ESJ4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NckipsdQ9ESJ4 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.48■□□□□ 0.55
NckipsdQ9ESJ4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NckipsdQ9ESJ4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NckipsdQ9ESJ4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
NckipsdQ9ESJ4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
NckipsdQ9ESJ4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NckipsdQ9ESJ4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NckipsdQ9ESJ4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NckipsdQ9ESJ4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NckipsdQ9ESJ4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.47■□□□□ 0.55
NckipsdQ9ESJ4 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NckipsdQ9ESJ4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NckipsdQ9ESJ4 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.47■□□□□ 0.55
NckipsdQ9ESJ4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.47■□□□□ 0.55
NckipsdQ9ESJ4 Gm38027-201ENSMUST00000192315 235 ntBASIC18.47■□□□□ 0.55
NckipsdQ9ESJ4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.47■□□□□ 0.55
NckipsdQ9ESJ4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.47■□□□□ 0.55
NckipsdQ9ESJ4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
NckipsdQ9ESJ4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NckipsdQ9ESJ4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms