Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC20.38■□□□□ 0.85
Upf1Q9EPU0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC20.38■□□□□ 0.85
Upf1Q9EPU0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC20.38■□□□□ 0.85
Upf1Q9EPU0 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.38■□□□□ 0.85
Upf1Q9EPU0 Gm6296-201ENSMUST00000222599 943 ntBASIC20.38■□□□□ 0.85
Upf1Q9EPU0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Upf1Q9EPU0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.38■□□□□ 0.85
Upf1Q9EPU0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Upf1Q9EPU0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Upf1Q9EPU0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.37■□□□□ 0.85
Upf1Q9EPU0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Upf1Q9EPU0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Upf1Q9EPU0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.37■□□□□ 0.85
Upf1Q9EPU0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Upf1Q9EPU0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Upf1Q9EPU0 Gm15920-201ENSMUST00000118998 402 ntBASIC20.36■□□□□ 0.85
Upf1Q9EPU0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Upf1Q9EPU0 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Upf1Q9EPU0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Upf1Q9EPU0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Upf1Q9EPU0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Upf1Q9EPU0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Upf1Q9EPU0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.35■□□□□ 0.85
Upf1Q9EPU0 Gm12644-201ENSMUST00000119935 606 ntBASIC20.35■□□□□ 0.85
Upf1Q9EPU0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Upf1Q9EPU0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.35■□□□□ 0.85
Upf1Q9EPU0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Upf1Q9EPU0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Upf1Q9EPU0 Gm10175-201ENSMUST00000086013 645 ntBASIC20.35■□□□□ 0.85
Upf1Q9EPU0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.35■□□□□ 0.85
Upf1Q9EPU0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Upf1Q9EPU0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Upf1Q9EPU0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Upf1Q9EPU0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Upf1Q9EPU0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
Upf1Q9EPU0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Upf1Q9EPU0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Upf1Q9EPU0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Upf1Q9EPU0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Upf1Q9EPU0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Upf1Q9EPU0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Upf1Q9EPU0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC20.34■□□□□ 0.85
Upf1Q9EPU0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC20.34■□□□□ 0.85
Upf1Q9EPU0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC20.34■□□□□ 0.85
Upf1Q9EPU0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Upf1Q9EPU0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Upf1Q9EPU0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Upf1Q9EPU0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Upf1Q9EPU0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Upf1Q9EPU0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Upf1Q9EPU0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Upf1Q9EPU0 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.33■□□□□ 0.85
Upf1Q9EPU0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Upf1Q9EPU0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Upf1Q9EPU0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Upf1Q9EPU0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC20.33■□□□□ 0.85
Upf1Q9EPU0 Gm10060-201ENSMUST00000212002 111 ntBASIC20.33■□□□□ 0.85
Upf1Q9EPU0 AC158982.1-201ENSMUST00000228377 901 ntBASIC20.33■□□□□ 0.85
Upf1Q9EPU0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Upf1Q9EPU0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Upf1Q9EPU0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Upf1Q9EPU0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Upf1Q9EPU0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Upf1Q9EPU0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Upf1Q9EPU0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Upf1Q9EPU0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Upf1Q9EPU0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Upf1Q9EPU0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Upf1Q9EPU0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.32■□□□□ 0.84
Upf1Q9EPU0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Upf1Q9EPU0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Upf1Q9EPU0 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.32■□□□□ 0.84
Upf1Q9EPU0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Upf1Q9EPU0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Upf1Q9EPU0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Upf1Q9EPU0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.32■□□□□ 0.84
Upf1Q9EPU0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Upf1Q9EPU0 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.31■□□□□ 0.84
Upf1Q9EPU0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Upf1Q9EPU0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.31■□□□□ 0.84
Upf1Q9EPU0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Upf1Q9EPU0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC20.31■□□□□ 0.84
Upf1Q9EPU0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Upf1Q9EPU0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC20.31■□□□□ 0.84
Upf1Q9EPU0 Gm14822-201ENSMUST00000122247 291 ntBASIC20.31■□□□□ 0.84
Upf1Q9EPU0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Upf1Q9EPU0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Upf1Q9EPU0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Upf1Q9EPU0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Upf1Q9EPU0 AC225888.1-201ENSMUST00000227184 728 ntBASIC20.31■□□□□ 0.84
Upf1Q9EPU0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Upf1Q9EPU0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Upf1Q9EPU0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC20.3■□□□□ 0.84
Upf1Q9EPU0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Upf1Q9EPU0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.3■□□□□ 0.84
Upf1Q9EPU0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Upf1Q9EPU0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Upf1Q9EPU0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Upf1Q9EPU0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.3■□□□□ 0.84
Upf1Q9EPU0 Gm37025-201ENSMUST00000195159 829 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms