Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Snx29Q9D3S3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snx29Q9D3S3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Snx29Q9D3S3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snx29Q9D3S3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snx29Q9D3S3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snx29Q9D3S3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Snx29Q9D3S3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Snx29Q9D3S3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Snx29Q9D3S3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Snx29Q9D3S3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Snx29Q9D3S3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Snx29Q9D3S3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Snx29Q9D3S3 Gm33142-201ENSMUST00000193913 867 ntBASIC19.6■□□□□ 0.73
Snx29Q9D3S3 Gm7791-201ENSMUST00000219066 539 ntBASIC19.6■□□□□ 0.73
Snx29Q9D3S3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.6■□□□□ 0.73
Snx29Q9D3S3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Snx29Q9D3S3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Snx29Q9D3S3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Snx29Q9D3S3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Snx29Q9D3S3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Snx29Q9D3S3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.59■□□□□ 0.73
Snx29Q9D3S3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Snx29Q9D3S3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Snx29Q9D3S3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Snx29Q9D3S3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Snx29Q9D3S3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.59■□□□□ 0.73
Snx29Q9D3S3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Snx29Q9D3S3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Snx29Q9D3S3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Snx29Q9D3S3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Snx29Q9D3S3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Snx29Q9D3S3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Snx29Q9D3S3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Snx29Q9D3S3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Snx29Q9D3S3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Snx29Q9D3S3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Snx29Q9D3S3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Snx29Q9D3S3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Snx29Q9D3S3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Snx29Q9D3S3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Snx29Q9D3S3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Snx29Q9D3S3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Snx29Q9D3S3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Snx29Q9D3S3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Snx29Q9D3S3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Snx29Q9D3S3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Snx29Q9D3S3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Snx29Q9D3S3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
Snx29Q9D3S3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Snx29Q9D3S3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Snx29Q9D3S3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Snx29Q9D3S3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Snx29Q9D3S3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Snx29Q9D3S3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Snx29Q9D3S3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Snx29Q9D3S3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Snx29Q9D3S3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.57■□□□□ 0.72
Snx29Q9D3S3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Snx29Q9D3S3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Snx29Q9D3S3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Snx29Q9D3S3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Snx29Q9D3S3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Snx29Q9D3S3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Snx29Q9D3S3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Snx29Q9D3S3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Snx29Q9D3S3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Snx29Q9D3S3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Snx29Q9D3S3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Snx29Q9D3S3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Snx29Q9D3S3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Snx29Q9D3S3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Snx29Q9D3S3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Snx29Q9D3S3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Snx29Q9D3S3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.56■□□□□ 0.72
Snx29Q9D3S3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
Snx29Q9D3S3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.56■□□□□ 0.72
Snx29Q9D3S3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Snx29Q9D3S3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Snx29Q9D3S3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Snx29Q9D3S3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Snx29Q9D3S3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Snx29Q9D3S3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Snx29Q9D3S3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Snx29Q9D3S3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Snx29Q9D3S3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Snx29Q9D3S3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Snx29Q9D3S3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Snx29Q9D3S3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Snx29Q9D3S3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Snx29Q9D3S3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Snx29Q9D3S3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Snx29Q9D3S3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.55■□□□□ 0.72
Snx29Q9D3S3 Gm25016-201ENSMUST00000158399 131 ntBASIC19.55■□□□□ 0.72
Snx29Q9D3S3 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.55■□□□□ 0.72
Snx29Q9D3S3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Snx29Q9D3S3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Snx29Q9D3S3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Snx29Q9D3S3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Snx29Q9D3S3 Gm37025-201ENSMUST00000195159 829 ntBASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms