Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt2Q9CZN7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt2Q9CZN7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.01■□□□□ 0.31
Shmt2Q9CZN7 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.01■□□□□ 0.31
Shmt2Q9CZN7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt2Q9CZN7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt2Q9CZN7 Gm13148-201ENSMUST00000118892 745 ntBASIC17.01■□□□□ 0.31
Shmt2Q9CZN7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt2Q9CZN7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt2Q9CZN7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt2Q9CZN7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt2Q9CZN7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt2Q9CZN7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt2Q9CZN7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt2Q9CZN7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt2Q9CZN7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Shmt2Q9CZN7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shmt2Q9CZN7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shmt2Q9CZN7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shmt2Q9CZN7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shmt2Q9CZN7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shmt2Q9CZN7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Shmt2Q9CZN7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shmt2Q9CZN7 Gm3807-201ENSMUST00000193520 1168 ntBASIC17■□□□□ 0.31
Shmt2Q9CZN7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Shmt2Q9CZN7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shmt2Q9CZN7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shmt2Q9CZN7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shmt2Q9CZN7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Shmt2Q9CZN7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shmt2Q9CZN7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shmt2Q9CZN7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shmt2Q9CZN7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt2Q9CZN7 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.99■□□□□ 0.31
Shmt2Q9CZN7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt2Q9CZN7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt2Q9CZN7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt2Q9CZN7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.99■□□□□ 0.31
Shmt2Q9CZN7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.99■□□□□ 0.31
Shmt2Q9CZN7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt2Q9CZN7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Shmt2Q9CZN7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt2Q9CZN7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Shmt2Q9CZN7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt2Q9CZN7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt2Q9CZN7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Shmt2Q9CZN7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shmt2Q9CZN7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Shmt2Q9CZN7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shmt2Q9CZN7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shmt2Q9CZN7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shmt2Q9CZN7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Shmt2Q9CZN7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Shmt2Q9CZN7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shmt2Q9CZN7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shmt2Q9CZN7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Shmt2Q9CZN7 Gm29257-201ENSMUST00000186115 639 ntBASIC16.98■□□□□ 0.31
Shmt2Q9CZN7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.98■□□□□ 0.31
Shmt2Q9CZN7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shmt2Q9CZN7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shmt2Q9CZN7 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.98■□□□□ 0.31
Shmt2Q9CZN7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shmt2Q9CZN7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shmt2Q9CZN7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shmt2Q9CZN7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Shmt2Q9CZN7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shmt2Q9CZN7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shmt2Q9CZN7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shmt2Q9CZN7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shmt2Q9CZN7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.97■□□□□ 0.31
Shmt2Q9CZN7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.97■□□□□ 0.31
Shmt2Q9CZN7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Shmt2Q9CZN7 Gm5408-201ENSMUST00000197998 747 ntBASIC16.97■□□□□ 0.31
Shmt2Q9CZN7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shmt2Q9CZN7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Shmt2Q9CZN7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Shmt2Q9CZN7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shmt2Q9CZN7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shmt2Q9CZN7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shmt2Q9CZN7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shmt2Q9CZN7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shmt2Q9CZN7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shmt2Q9CZN7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Shmt2Q9CZN7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shmt2Q9CZN7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Shmt2Q9CZN7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shmt2Q9CZN7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shmt2Q9CZN7 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.96■□□□□ 0.31
Shmt2Q9CZN7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Shmt2Q9CZN7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.96■□□□□ 0.31
Shmt2Q9CZN7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.96■□□□□ 0.31
Shmt2Q9CZN7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shmt2Q9CZN7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.96■□□□□ 0.31
Shmt2Q9CZN7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shmt2Q9CZN7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Shmt2Q9CZN7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shmt2Q9CZN7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shmt2Q9CZN7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.96■□□□□ 0.31
Shmt2Q9CZN7 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.96■□□□□ 0.3
Shmt2Q9CZN7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms