Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf135Q9CWS1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
Rnf135Q9CWS1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.53■□□□□ 0.56
Rnf135Q9CWS1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf135Q9CWS1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf135Q9CWS1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf135Q9CWS1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf135Q9CWS1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf135Q9CWS1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf135Q9CWS1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf135Q9CWS1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf135Q9CWS1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf135Q9CWS1 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.52■□□□□ 0.56
Rnf135Q9CWS1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Rnf135Q9CWS1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf135Q9CWS1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf135Q9CWS1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf135Q9CWS1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Rnf135Q9CWS1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf135Q9CWS1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf135Q9CWS1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf135Q9CWS1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf135Q9CWS1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf135Q9CWS1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf135Q9CWS1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf135Q9CWS1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf135Q9CWS1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf135Q9CWS1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Rnf135Q9CWS1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf135Q9CWS1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf135Q9CWS1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.51■□□□□ 0.55
Rnf135Q9CWS1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf135Q9CWS1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Rnf135Q9CWS1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf135Q9CWS1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf135Q9CWS1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf135Q9CWS1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
Rnf135Q9CWS1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf135Q9CWS1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf135Q9CWS1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rnf135Q9CWS1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf135Q9CWS1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf135Q9CWS1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf135Q9CWS1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf135Q9CWS1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf135Q9CWS1 Gm13148-201ENSMUST00000118892 745 ntBASIC18.5■□□□□ 0.55
Rnf135Q9CWS1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf135Q9CWS1 Gm8520-201ENSMUST00000186517 868 ntBASIC18.5■□□□□ 0.55
Rnf135Q9CWS1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.5■□□□□ 0.55
Rnf135Q9CWS1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf135Q9CWS1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf135Q9CWS1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf135Q9CWS1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf135Q9CWS1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf135Q9CWS1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf135Q9CWS1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf135Q9CWS1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.49■□□□□ 0.55
Rnf135Q9CWS1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf135Q9CWS1 Gm12527-201ENSMUST00000117967 564 ntBASIC18.49■□□□□ 0.55
Rnf135Q9CWS1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.49■□□□□ 0.55
Rnf135Q9CWS1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf135Q9CWS1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.49■□□□□ 0.55
Rnf135Q9CWS1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf135Q9CWS1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf135Q9CWS1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf135Q9CWS1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf135Q9CWS1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf135Q9CWS1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf135Q9CWS1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Rnf135Q9CWS1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf135Q9CWS1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf135Q9CWS1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf135Q9CWS1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.49■□□□□ 0.55
Rnf135Q9CWS1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rnf135Q9CWS1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf135Q9CWS1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf135Q9CWS1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf135Q9CWS1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf135Q9CWS1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf135Q9CWS1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf135Q9CWS1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.48■□□□□ 0.55
Rnf135Q9CWS1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf135Q9CWS1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf135Q9CWS1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf135Q9CWS1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.48■□□□□ 0.55
Rnf135Q9CWS1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf135Q9CWS1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.48■□□□□ 0.55
Rnf135Q9CWS1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.48■□□□□ 0.55
Rnf135Q9CWS1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.48■□□□□ 0.55
Rnf135Q9CWS1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf135Q9CWS1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf135Q9CWS1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf135Q9CWS1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf135Q9CWS1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf135Q9CWS1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf135Q9CWS1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf135Q9CWS1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf135Q9CWS1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf135Q9CWS1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf135Q9CWS1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms