Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim11Q99PQ2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim11Q99PQ2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim11Q99PQ2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.3■□□□□ 0.84
Trim11Q99PQ2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.3■□□□□ 0.84
Trim11Q99PQ2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.3■□□□□ 0.84
Trim11Q99PQ2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim11Q99PQ2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim11Q99PQ2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim11Q99PQ2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.29■□□□□ 0.84
Trim11Q99PQ2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.29■□□□□ 0.84
Trim11Q99PQ2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.29■□□□□ 0.84
Trim11Q99PQ2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim11Q99PQ2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim11Q99PQ2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim11Q99PQ2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim11Q99PQ2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim11Q99PQ2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim11Q99PQ2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim11Q99PQ2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim11Q99PQ2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.29■□□□□ 0.84
Trim11Q99PQ2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim11Q99PQ2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Trim11Q99PQ2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Trim11Q99PQ2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.28■□□□□ 0.84
Trim11Q99PQ2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim11Q99PQ2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim11Q99PQ2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim11Q99PQ2 Rab3c-203ENSMUST00000224180 967 ntBASIC20.28■□□□□ 0.84
Trim11Q99PQ2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim11Q99PQ2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim11Q99PQ2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim11Q99PQ2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.27■□□□□ 0.84
Trim11Q99PQ2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.27■□□□□ 0.84
Trim11Q99PQ2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim11Q99PQ2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Trim11Q99PQ2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Trim11Q99PQ2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim11Q99PQ2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim11Q99PQ2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.27■□□□□ 0.84
Trim11Q99PQ2 Gm12933-201ENSMUST00000120203 872 ntBASIC20.27■□□□□ 0.84
Trim11Q99PQ2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.27■□□□□ 0.84
Trim11Q99PQ2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.27■□□□□ 0.84
Trim11Q99PQ2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim11Q99PQ2 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.27■□□□□ 0.84
Trim11Q99PQ2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim11Q99PQ2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Trim11Q99PQ2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim11Q99PQ2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Trim11Q99PQ2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim11Q99PQ2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim11Q99PQ2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim11Q99PQ2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Trim11Q99PQ2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim11Q99PQ2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim11Q99PQ2 Idnk-204ENSMUST00000226010 1898 ntBASIC20.26■□□□□ 0.83
Trim11Q99PQ2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim11Q99PQ2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim11Q99PQ2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim11Q99PQ2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim11Q99PQ2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim11Q99PQ2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim11Q99PQ2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.26■□□□□ 0.83
Trim11Q99PQ2 Gm37179-201ENSMUST00000194862 823 ntBASIC20.26■□□□□ 0.83
Trim11Q99PQ2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim11Q99PQ2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.26■□□□□ 0.83
Trim11Q99PQ2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim11Q99PQ2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim11Q99PQ2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim11Q99PQ2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim11Q99PQ2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim11Q99PQ2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Trim11Q99PQ2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim11Q99PQ2 Flg-201ENSMUST00000050758 1488 ntBASIC20.25■□□□□ 0.83
Trim11Q99PQ2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Trim11Q99PQ2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim11Q99PQ2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.25■□□□□ 0.83
Trim11Q99PQ2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.25■□□□□ 0.83
Trim11Q99PQ2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim11Q99PQ2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim11Q99PQ2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim11Q99PQ2 Zfp783-201ENSMUST00000095946 670 ntBASIC20.25■□□□□ 0.83
Trim11Q99PQ2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim11Q99PQ2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim11Q99PQ2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Trim11Q99PQ2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim11Q99PQ2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim11Q99PQ2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trim11Q99PQ2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.24■□□□□ 0.83
Trim11Q99PQ2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.24■□□□□ 0.83
Trim11Q99PQ2 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.24■□□□□ 0.83
Trim11Q99PQ2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim11Q99PQ2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Trim11Q99PQ2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim11Q99PQ2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim11Q99PQ2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim11Q99PQ2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim11Q99PQ2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim11Q99PQ2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim11Q99PQ2 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms