Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh23Q99PF4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh23Q99PF4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh23Q99PF4 Grk6-206ENSMUST00000224995 2971 ntBASIC18.25■□□□□ 0.51
Cdh23Q99PF4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh23Q99PF4 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh23Q99PF4 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.25■□□□□ 0.51
Cdh23Q99PF4 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh23Q99PF4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh23Q99PF4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh23Q99PF4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cdh23Q99PF4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh23Q99PF4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh23Q99PF4 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh23Q99PF4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh23Q99PF4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh23Q99PF4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cdh23Q99PF4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh23Q99PF4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cdh23Q99PF4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh23Q99PF4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh23Q99PF4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh23Q99PF4 Gm7063-201ENSMUST00000186840 981 ntBASIC18.23■□□□□ 0.51
Cdh23Q99PF4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cdh23Q99PF4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh23Q99PF4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh23Q99PF4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh23Q99PF4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh23Q99PF4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cdh23Q99PF4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cdh23Q99PF4 Gm18206-201ENSMUST00000207027 926 ntBASIC18.23■□□□□ 0.51
Cdh23Q99PF4 Gm7213-201ENSMUST00000215977 950 ntBASIC18.23■□□□□ 0.51
Cdh23Q99PF4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh23Q99PF4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh23Q99PF4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.22■□□□□ 0.51
Cdh23Q99PF4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh23Q99PF4 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh23Q99PF4 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.22■□□□□ 0.51
Cdh23Q99PF4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh23Q99PF4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh23Q99PF4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh23Q99PF4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cdh23Q99PF4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh23Q99PF4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh23Q99PF4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh23Q99PF4 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Cdh23Q99PF4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cdh23Q99PF4 Notumos-201ENSMUST00000151998 2659 ntBASIC18.21■□□□□ 0.51
Cdh23Q99PF4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh23Q99PF4 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.21■□□□□ 0.51
Cdh23Q99PF4 Gm10566-201ENSMUST00000086739 996 ntBASIC18.21■□□□□ 0.51
Cdh23Q99PF4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh23Q99PF4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.21■□□□□ 0.51
Cdh23Q99PF4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh23Q99PF4 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cdh23Q99PF4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Cdh23Q99PF4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh23Q99PF4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cdh23Q99PF4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh23Q99PF4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.2■□□□□ 0.5
Cdh23Q99PF4 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.2■□□□□ 0.5
Cdh23Q99PF4 Gm2651-201ENSMUST00000203560 838 ntBASIC18.2■□□□□ 0.5
Cdh23Q99PF4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh23Q99PF4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh23Q99PF4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh23Q99PF4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh23Q99PF4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh23Q99PF4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Cdh23Q99PF4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh23Q99PF4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.19■□□□□ 0.5
Cdh23Q99PF4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.19■□□□□ 0.5
Cdh23Q99PF4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cdh23Q99PF4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh23Q99PF4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh23Q99PF4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh23Q99PF4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh23Q99PF4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh23Q99PF4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.19■□□□□ 0.5
Cdh23Q99PF4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh23Q99PF4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh23Q99PF4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.19■□□□□ 0.5
Cdh23Q99PF4 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.19■□□□□ 0.5
Cdh23Q99PF4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh23Q99PF4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh23Q99PF4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh23Q99PF4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh23Q99PF4 Gm7638-201ENSMUST00000121348 967 ntBASIC18.18■□□□□ 0.5
Cdh23Q99PF4 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh23Q99PF4 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.18■□□□□ 0.5
Cdh23Q99PF4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh23Q99PF4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh23Q99PF4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cdh23Q99PF4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh23Q99PF4 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.18■□□□□ 0.5
Cdh23Q99PF4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh23Q99PF4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh23Q99PF4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh23Q99PF4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Cdh23Q99PF4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.17■□□□□ 0.5
Cdh23Q99PF4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms