Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tpgs1Q99MS8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tpgs1Q99MS8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tpgs1Q99MS8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.56■□□□□ 0.56
Tpgs1Q99MS8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tpgs1Q99MS8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Tpgs1Q99MS8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Tpgs1Q99MS8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tpgs1Q99MS8 Gm8969-201ENSMUST00000199694 526 ntBASIC18.56■□□□□ 0.56
Tpgs1Q99MS8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tpgs1Q99MS8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tpgs1Q99MS8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tpgs1Q99MS8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tpgs1Q99MS8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tpgs1Q99MS8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tpgs1Q99MS8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tpgs1Q99MS8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tpgs1Q99MS8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tpgs1Q99MS8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.55■□□□□ 0.56
Tpgs1Q99MS8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tpgs1Q99MS8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Tpgs1Q99MS8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tpgs1Q99MS8 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.55■□□□□ 0.56
Tpgs1Q99MS8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tpgs1Q99MS8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tpgs1Q99MS8 Gm10812-201ENSMUST00000099864 546 ntBASIC18.55■□□□□ 0.56
Tpgs1Q99MS8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tpgs1Q99MS8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Tpgs1Q99MS8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tpgs1Q99MS8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tpgs1Q99MS8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tpgs1Q99MS8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tpgs1Q99MS8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tpgs1Q99MS8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpgs1Q99MS8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpgs1Q99MS8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpgs1Q99MS8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Tpgs1Q99MS8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
Tpgs1Q99MS8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Tpgs1Q99MS8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.54■□□□□ 0.56
Tpgs1Q99MS8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Tpgs1Q99MS8 Mir8112-201ENSMUST00000184382 131 ntBASIC18.54■□□□□ 0.56
Tpgs1Q99MS8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpgs1Q99MS8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tpgs1Q99MS8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpgs1Q99MS8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpgs1Q99MS8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpgs1Q99MS8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpgs1Q99MS8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpgs1Q99MS8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.54■□□□□ 0.56
Tpgs1Q99MS8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tpgs1Q99MS8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tpgs1Q99MS8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpgs1Q99MS8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tpgs1Q99MS8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpgs1Q99MS8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tpgs1Q99MS8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.53■□□□□ 0.56
Tpgs1Q99MS8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.53■□□□□ 0.56
Tpgs1Q99MS8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tpgs1Q99MS8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tpgs1Q99MS8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tpgs1Q99MS8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Tpgs1Q99MS8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.52■□□□□ 0.56
Tpgs1Q99MS8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tpgs1Q99MS8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tpgs1Q99MS8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tpgs1Q99MS8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.52■□□□□ 0.56
Tpgs1Q99MS8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.52■□□□□ 0.56
Tpgs1Q99MS8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tpgs1Q99MS8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.52■□□□□ 0.56
Tpgs1Q99MS8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tpgs1Q99MS8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.52■□□□□ 0.56
Tpgs1Q99MS8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Tpgs1Q99MS8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.55
Tpgs1Q99MS8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tpgs1Q99MS8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Tpgs1Q99MS8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tpgs1Q99MS8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tpgs1Q99MS8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tpgs1Q99MS8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tpgs1Q99MS8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tpgs1Q99MS8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tpgs1Q99MS8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tpgs1Q99MS8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tpgs1Q99MS8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tpgs1Q99MS8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tpgs1Q99MS8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.51■□□□□ 0.55
Tpgs1Q99MS8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Tpgs1Q99MS8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.51■□□□□ 0.55
Tpgs1Q99MS8 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.51■□□□□ 0.55
Tpgs1Q99MS8 Mir1199-201ENSMUST00000117015 119 ntBASIC18.51■□□□□ 0.55
Tpgs1Q99MS8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tpgs1Q99MS8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tpgs1Q99MS8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
Tpgs1Q99MS8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tpgs1Q99MS8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tpgs1Q99MS8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Tpgs1Q99MS8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tpgs1Q99MS8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tpgs1Q99MS8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms