Protein–RNA interactions for Protein: Q99KG7

Hps4, Hermansky-Pudlak syndrome 4 protein homolog, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps4Q99KG7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hps4Q99KG7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hps4Q99KG7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hps4Q99KG7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hps4Q99KG7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hps4Q99KG7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hps4Q99KG7 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hps4Q99KG7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.94■□□□□ 0.94
Hps4Q99KG7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hps4Q99KG7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Hps4Q99KG7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.94■□□□□ 0.94
Hps4Q99KG7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hps4Q99KG7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hps4Q99KG7 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Hps4Q99KG7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.94■□□□□ 0.94
Hps4Q99KG7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hps4Q99KG7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hps4Q99KG7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.94■□□□□ 0.94
Hps4Q99KG7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hps4Q99KG7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hps4Q99KG7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hps4Q99KG7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hps4Q99KG7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Hps4Q99KG7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hps4Q99KG7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.93■□□□□ 0.94
Hps4Q99KG7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Hps4Q99KG7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.93■□□□□ 0.94
Hps4Q99KG7 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.93■□□□□ 0.94
Hps4Q99KG7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Hps4Q99KG7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Hps4Q99KG7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hps4Q99KG7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hps4Q99KG7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Hps4Q99KG7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hps4Q99KG7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hps4Q99KG7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Hps4Q99KG7 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.92■□□□□ 0.94
Hps4Q99KG7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Hps4Q99KG7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Hps4Q99KG7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.92■□□□□ 0.94
Hps4Q99KG7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hps4Q99KG7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.92■□□□□ 0.94
Hps4Q99KG7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Hps4Q99KG7 Gm18959-201ENSMUST00000208954 655 ntBASIC20.92■□□□□ 0.94
Hps4Q99KG7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.92■□□□□ 0.94
Hps4Q99KG7 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hps4Q99KG7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hps4Q99KG7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Hps4Q99KG7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.92■□□□□ 0.94
Hps4Q99KG7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hps4Q99KG7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hps4Q99KG7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hps4Q99KG7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hps4Q99KG7 Gm13401-201ENSMUST00000117074 291 ntBASIC20.91■□□□□ 0.94
Hps4Q99KG7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.91■□□□□ 0.94
Hps4Q99KG7 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Hps4Q99KG7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hps4Q99KG7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.91■□□□□ 0.94
Hps4Q99KG7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hps4Q99KG7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hps4Q99KG7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.9■□□□□ 0.94
Hps4Q99KG7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hps4Q99KG7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hps4Q99KG7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hps4Q99KG7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hps4Q99KG7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hps4Q99KG7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hps4Q99KG7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hps4Q99KG7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hps4Q99KG7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hps4Q99KG7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hps4Q99KG7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hps4Q99KG7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hps4Q99KG7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hps4Q99KG7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hps4Q99KG7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.9■□□□□ 0.94
Hps4Q99KG7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Hps4Q99KG7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Hps4Q99KG7 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.89■□□□□ 0.94
Hps4Q99KG7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hps4Q99KG7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Hps4Q99KG7 Gm10418-201ENSMUST00000100943 576 ntBASIC20.89■□□□□ 0.93
Hps4Q99KG7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hps4Q99KG7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hps4Q99KG7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Hps4Q99KG7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hps4Q99KG7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hps4Q99KG7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hps4Q99KG7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hps4Q99KG7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hps4Q99KG7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hps4Q99KG7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Hps4Q99KG7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Hps4Q99KG7 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hps4Q99KG7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hps4Q99KG7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.88■□□□□ 0.93
Hps4Q99KG7 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.88■□□□□ 0.93
Hps4Q99KG7 Gm6659-201ENSMUST00000174752 547 ntBASIC20.88■□□□□ 0.93
Hps4Q99KG7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hps4Q99KG7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms