Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb22Q91XZ8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Pcdhb22Q91XZ8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb22Q91XZ8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb22Q91XZ8 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.8■□□□□ 0.92
Pcdhb22Q91XZ8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Pcdhb22Q91XZ8 Gm15378-201ENSMUST00000121894 207 ntBASIC20.8■□□□□ 0.92
Pcdhb22Q91XZ8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb22Q91XZ8 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.8■□□□□ 0.92
Pcdhb22Q91XZ8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.8■□□□□ 0.92
Pcdhb22Q91XZ8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Pcdhb22Q91XZ8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb22Q91XZ8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
Pcdhb22Q91XZ8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb22Q91XZ8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb22Q91XZ8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb22Q91XZ8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb22Q91XZ8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb22Q91XZ8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb22Q91XZ8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb22Q91XZ8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb22Q91XZ8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb22Q91XZ8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.79■□□□□ 0.92
Pcdhb22Q91XZ8 Gm42545-201ENSMUST00000202755 922 ntBASIC20.79■□□□□ 0.92
Pcdhb22Q91XZ8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb22Q91XZ8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb22Q91XZ8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Pcdhb22Q91XZ8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Pcdhb22Q91XZ8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb22Q91XZ8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb22Q91XZ8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb22Q91XZ8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb22Q91XZ8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
Pcdhb22Q91XZ8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb22Q91XZ8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Pcdhb22Q91XZ8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb22Q91XZ8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb22Q91XZ8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb22Q91XZ8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb22Q91XZ8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb22Q91XZ8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb22Q91XZ8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.78■□□□□ 0.92
Pcdhb22Q91XZ8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb22Q91XZ8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb22Q91XZ8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb22Q91XZ8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb22Q91XZ8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb22Q91XZ8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb22Q91XZ8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.77■□□□□ 0.92
Pcdhb22Q91XZ8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb22Q91XZ8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb22Q91XZ8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb22Q91XZ8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb22Q91XZ8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb22Q91XZ8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb22Q91XZ8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdhb22Q91XZ8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb22Q91XZ8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb22Q91XZ8 Gm37292-201ENSMUST00000192062 758 ntBASIC20.76■□□□□ 0.91
Pcdhb22Q91XZ8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.76■□□□□ 0.91
Pcdhb22Q91XZ8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb22Q91XZ8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb22Q91XZ8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb22Q91XZ8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb22Q91XZ8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Pcdhb22Q91XZ8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Pcdhb22Q91XZ8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb22Q91XZ8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb22Q91XZ8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb22Q91XZ8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.75■□□□□ 0.91
Pcdhb22Q91XZ8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Pcdhb22Q91XZ8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb22Q91XZ8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb22Q91XZ8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb22Q91XZ8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb22Q91XZ8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb22Q91XZ8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb22Q91XZ8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Pcdhb22Q91XZ8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb22Q91XZ8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb22Q91XZ8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb22Q91XZ8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb22Q91XZ8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Pcdhb22Q91XZ8 Gm13401-201ENSMUST00000117074 291 ntBASIC20.74■□□□□ 0.91
Pcdhb22Q91XZ8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.74■□□□□ 0.91
Pcdhb22Q91XZ8 Gm22240-201ENSMUST00000175225 82 ntBASIC20.74■□□□□ 0.91
Pcdhb22Q91XZ8 Gm43183-201ENSMUST00000200632 547 ntBASIC20.74■□□□□ 0.91
Pcdhb22Q91XZ8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Pcdhb22Q91XZ8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb22Q91XZ8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb22Q91XZ8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb22Q91XZ8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb22Q91XZ8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb22Q91XZ8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb22Q91XZ8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.73■□□□□ 0.91
Pcdhb22Q91XZ8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb22Q91XZ8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.73■□□□□ 0.91
Pcdhb22Q91XZ8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb22Q91XZ8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
Pcdhb22Q91XZ8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms