Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb5Q91XZ5 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC21.02■□□□□ 0.96
Pcdhb5Q91XZ5 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb5Q91XZ5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.02■□□□□ 0.96
Pcdhb5Q91XZ5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Pcdhb5Q91XZ5 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb5Q91XZ5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb5Q91XZ5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb5Q91XZ5 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Pcdhb5Q91XZ5 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb5Q91XZ5 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC21.01■□□□□ 0.95
Pcdhb5Q91XZ5 Gm10418-201ENSMUST00000100943 576 ntBASIC21.01■□□□□ 0.95
Pcdhb5Q91XZ5 Mir5130-201ENSMUST00000175160 84 ntBASIC21.01■□□□□ 0.95
Pcdhb5Q91XZ5 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Pcdhb5Q91XZ5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb5Q91XZ5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC21.01■□□□□ 0.95
Pcdhb5Q91XZ5 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb5Q91XZ5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb5Q91XZ5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.01■□□□□ 0.95
Pcdhb5Q91XZ5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Pcdhb5Q91XZ5 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb5Q91XZ5 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb5Q91XZ5 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb5Q91XZ5 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb5Q91XZ5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb5Q91XZ5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb5Q91XZ5 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb5Q91XZ5 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21■□□□□ 0.95
Pcdhb5Q91XZ5 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC21■□□□□ 0.95
Pcdhb5Q91XZ5 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb5Q91XZ5 Dapk1-207ENSMUST00000226059 5009 ntBASIC21■□□□□ 0.95
Pcdhb5Q91XZ5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb5Q91XZ5 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb5Q91XZ5 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.99■□□□□ 0.95
Pcdhb5Q91XZ5 Gm21362-201ENSMUST00000194272 928 ntBASIC20.99■□□□□ 0.95
Pcdhb5Q91XZ5 Gm18032-201ENSMUST00000222541 538 ntBASIC20.99■□□□□ 0.95
Pcdhb5Q91XZ5 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb5Q91XZ5 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb5Q91XZ5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Pcdhb5Q91XZ5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Pcdhb5Q91XZ5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Pcdhb5Q91XZ5 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb5Q91XZ5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.98■□□□□ 0.95
Pcdhb5Q91XZ5 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb5Q91XZ5 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb5Q91XZ5 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb5Q91XZ5 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb5Q91XZ5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.98■□□□□ 0.95
Pcdhb5Q91XZ5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb5Q91XZ5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb5Q91XZ5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb5Q91XZ5 Gm10013-201ENSMUST00000106074 672 ntBASIC20.97■□□□□ 0.95
Pcdhb5Q91XZ5 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb5Q91XZ5 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Pcdhb5Q91XZ5 Gm23634-201ENSMUST00000175071 91 ntBASIC20.97■□□□□ 0.95
Pcdhb5Q91XZ5 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
Pcdhb5Q91XZ5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.97■□□□□ 0.95
Pcdhb5Q91XZ5 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb5Q91XZ5 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Pcdhb5Q91XZ5 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb5Q91XZ5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb5Q91XZ5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb5Q91XZ5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb5Q91XZ5 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb5Q91XZ5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb5Q91XZ5 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Pcdhb5Q91XZ5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Pcdhb5Q91XZ5 Gm13401-201ENSMUST00000117074 291 ntBASIC20.96■□□□□ 0.95
Pcdhb5Q91XZ5 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb5Q91XZ5 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb5Q91XZ5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb5Q91XZ5 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb5Q91XZ5 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb5Q91XZ5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb5Q91XZ5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.96■□□□□ 0.95
Pcdhb5Q91XZ5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Pcdhb5Q91XZ5 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.96■□□□□ 0.95
Pcdhb5Q91XZ5 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Pcdhb5Q91XZ5 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Pcdhb5Q91XZ5 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Pcdhb5Q91XZ5 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb5Q91XZ5 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb5Q91XZ5 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Pcdhb5Q91XZ5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.95■□□□□ 0.94
Pcdhb5Q91XZ5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb5Q91XZ5 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.95■□□□□ 0.94
Pcdhb5Q91XZ5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb5Q91XZ5 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.95■□□□□ 0.94
Pcdhb5Q91XZ5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.95■□□□□ 0.94
Pcdhb5Q91XZ5 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Pcdhb5Q91XZ5 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.95■□□□□ 0.94
Pcdhb5Q91XZ5 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb5Q91XZ5 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.95■□□□□ 0.94
Pcdhb5Q91XZ5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Pcdhb5Q91XZ5 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Pcdhb5Q91XZ5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb5Q91XZ5 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb5Q91XZ5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb5Q91XZ5 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.95■□□□□ 0.94
Pcdhb5Q91XZ5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms