Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trex1Q91XB0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.47■□□□□ 0.87
Trex1Q91XB0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trex1Q91XB0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Trex1Q91XB0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Trex1Q91XB0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trex1Q91XB0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trex1Q91XB0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trex1Q91XB0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trex1Q91XB0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trex1Q91XB0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Trex1Q91XB0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trex1Q91XB0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Trex1Q91XB0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.46■□□□□ 0.87
Trex1Q91XB0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trex1Q91XB0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trex1Q91XB0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trex1Q91XB0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Trex1Q91XB0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trex1Q91XB0 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.45■□□□□ 0.86
Trex1Q91XB0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Trex1Q91XB0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.45■□□□□ 0.86
Trex1Q91XB0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.45■□□□□ 0.86
Trex1Q91XB0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trex1Q91XB0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Trex1Q91XB0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.45■□□□□ 0.86
Trex1Q91XB0 Golph3-205ENSMUST00000228671 2842 ntBASIC20.45■□□□□ 0.86
Trex1Q91XB0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Trex1Q91XB0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.45■□□□□ 0.86
Trex1Q91XB0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trex1Q91XB0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.45■□□□□ 0.86
Trex1Q91XB0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trex1Q91XB0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trex1Q91XB0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Trex1Q91XB0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trex1Q91XB0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Trex1Q91XB0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trex1Q91XB0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trex1Q91XB0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trex1Q91XB0 Gm18032-201ENSMUST00000222541 538 ntBASIC20.44■□□□□ 0.86
Trex1Q91XB0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trex1Q91XB0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trex1Q91XB0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Trex1Q91XB0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Trex1Q91XB0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trex1Q91XB0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trex1Q91XB0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Trex1Q91XB0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trex1Q91XB0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trex1Q91XB0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trex1Q91XB0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trex1Q91XB0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trex1Q91XB0 Gm10418-201ENSMUST00000100943 576 ntBASIC20.43■□□□□ 0.86
Trex1Q91XB0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trex1Q91XB0 Gm2274-201ENSMUST00000184539 609 ntBASIC20.43■□□□□ 0.86
Trex1Q91XB0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Trex1Q91XB0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trex1Q91XB0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trex1Q91XB0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trex1Q91XB0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trex1Q91XB0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trex1Q91XB0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Trex1Q91XB0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trex1Q91XB0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Trex1Q91XB0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trex1Q91XB0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trex1Q91XB0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Trex1Q91XB0 Mir5130-201ENSMUST00000175160 84 ntBASIC20.42■□□□□ 0.86
Trex1Q91XB0 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.42■□□□□ 0.86
Trex1Q91XB0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.42■□□□□ 0.86
Trex1Q91XB0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Trex1Q91XB0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trex1Q91XB0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trex1Q91XB0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Trex1Q91XB0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trex1Q91XB0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Trex1Q91XB0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trex1Q91XB0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Trex1Q91XB0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trex1Q91XB0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trex1Q91XB0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trex1Q91XB0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trex1Q91XB0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trex1Q91XB0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trex1Q91XB0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trex1Q91XB0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Trex1Q91XB0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trex1Q91XB0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trex1Q91XB0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.4■□□□□ 0.86
Trex1Q91XB0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.4■□□□□ 0.86
Trex1Q91XB0 Gm24841-201ENSMUST00000158676 357 ntBASIC20.4■□□□□ 0.86
Trex1Q91XB0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Trex1Q91XB0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.4■□□□□ 0.86
Trex1Q91XB0 Gm29791-202ENSMUST00000207888 369 ntBASIC20.4■□□□□ 0.86
Trex1Q91XB0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.4■□□□□ 0.86
Trex1Q91XB0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Trex1Q91XB0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Trex1Q91XB0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trex1Q91XB0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trex1Q91XB0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms