Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm27459-201ENSMUST00000184860 107 ntBASIC21.43■■□□□ 1.02
StrcQ8VIM6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
StrcQ8VIM6 Gm43514-201ENSMUST00000198852 424 ntBASIC21.43■■□□□ 1.02
StrcQ8VIM6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
StrcQ8VIM6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
StrcQ8VIM6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
StrcQ8VIM6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
StrcQ8VIM6 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
StrcQ8VIM6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
StrcQ8VIM6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
StrcQ8VIM6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
StrcQ8VIM6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC21.43■■□□□ 1.02
StrcQ8VIM6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
StrcQ8VIM6 Tgds-204ENSMUST00000228543 1594 ntBASIC21.42■■□□□ 1.02
StrcQ8VIM6 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.42■■□□□ 1.02
StrcQ8VIM6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
StrcQ8VIM6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
StrcQ8VIM6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
StrcQ8VIM6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.41■■□□□ 1.02
StrcQ8VIM6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
StrcQ8VIM6 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
StrcQ8VIM6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
StrcQ8VIM6 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC21.41■■□□□ 1.02
StrcQ8VIM6 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
StrcQ8VIM6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
StrcQ8VIM6 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC21.41■■□□□ 1.02
StrcQ8VIM6 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
StrcQ8VIM6 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
StrcQ8VIM6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
StrcQ8VIM6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
StrcQ8VIM6 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
StrcQ8VIM6 Gm13884-201ENSMUST00000118103 829 ntBASIC21.41■■□□□ 1.02
StrcQ8VIM6 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
StrcQ8VIM6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
StrcQ8VIM6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
StrcQ8VIM6 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
StrcQ8VIM6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
StrcQ8VIM6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
StrcQ8VIM6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
StrcQ8VIM6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
StrcQ8VIM6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC21.4■■□□□ 1.02
StrcQ8VIM6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
StrcQ8VIM6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
StrcQ8VIM6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
StrcQ8VIM6 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
StrcQ8VIM6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
StrcQ8VIM6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
StrcQ8VIM6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
StrcQ8VIM6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
StrcQ8VIM6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.02
StrcQ8VIM6 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC21.39■■□□□ 1.02
StrcQ8VIM6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
StrcQ8VIM6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
StrcQ8VIM6 Birc2-201ENSMUST00000054878 378 ntBASIC21.39■■□□□ 1.02
StrcQ8VIM6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
StrcQ8VIM6 Gm26039-201ENSMUST00000158152 144 ntBASIC21.39■■□□□ 1.01
StrcQ8VIM6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC21.39■■□□□ 1.01
StrcQ8VIM6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
StrcQ8VIM6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
StrcQ8VIM6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
StrcQ8VIM6 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.38■■□□□ 1.01
StrcQ8VIM6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
StrcQ8VIM6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
StrcQ8VIM6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
StrcQ8VIM6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
StrcQ8VIM6 Mir8098-201ENSMUST00000184011 137 ntBASIC21.38■■□□□ 1.01
StrcQ8VIM6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
StrcQ8VIM6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
StrcQ8VIM6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
StrcQ8VIM6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
StrcQ8VIM6 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
StrcQ8VIM6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
StrcQ8VIM6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
StrcQ8VIM6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
StrcQ8VIM6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
StrcQ8VIM6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC21.37■■□□□ 1.01
StrcQ8VIM6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
StrcQ8VIM6 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC21.37■■□□□ 1.01
StrcQ8VIM6 Gm28659-201ENSMUST00000188013 759 ntBASIC21.37■■□□□ 1.01
StrcQ8VIM6 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
StrcQ8VIM6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
StrcQ8VIM6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
StrcQ8VIM6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
StrcQ8VIM6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
StrcQ8VIM6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
StrcQ8VIM6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
StrcQ8VIM6 Gm15794-201ENSMUST00000120182 631 ntBASIC21.36■■□□□ 1.01
StrcQ8VIM6 Gm5712-201ENSMUST00000199748 1043 ntBASIC21.36■■□□□ 1.01
StrcQ8VIM6 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC21.36■■□□□ 1.01
StrcQ8VIM6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC21.36■■□□□ 1.01
StrcQ8VIM6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
StrcQ8VIM6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
StrcQ8VIM6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
StrcQ8VIM6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.36■■□□□ 1.01
StrcQ8VIM6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
StrcQ8VIM6 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
StrcQ8VIM6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.36■■□□□ 1.01
StrcQ8VIM6 Gm6443-201ENSMUST00000203599 874 ntBASIC21.36■■□□□ 1.01
StrcQ8VIM6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC21.36■■□□□ 1.01
StrcQ8VIM6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms