Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gtf3c5Q8R2T8 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Gtf3c5Q8R2T8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Gtf3c5Q8R2T8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Gtf3c5Q8R2T8 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.83■□□□□ 0.93
Gtf3c5Q8R2T8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gtf3c5Q8R2T8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gtf3c5Q8R2T8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gtf3c5Q8R2T8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gtf3c5Q8R2T8 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gtf3c5Q8R2T8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf3c5Q8R2T8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf3c5Q8R2T8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf3c5Q8R2T8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf3c5Q8R2T8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf3c5Q8R2T8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.82■□□□□ 0.92
Gtf3c5Q8R2T8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.82■□□□□ 0.92
Gtf3c5Q8R2T8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.82■□□□□ 0.92
Gtf3c5Q8R2T8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.82■□□□□ 0.92
Gtf3c5Q8R2T8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf3c5Q8R2T8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf3c5Q8R2T8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf3c5Q8R2T8 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.82■□□□□ 0.92
Gtf3c5Q8R2T8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf3c5Q8R2T8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf3c5Q8R2T8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf3c5Q8R2T8 Fst-202ENSMUST00000223640 2612 ntBASIC20.82■□□□□ 0.92
Gtf3c5Q8R2T8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf3c5Q8R2T8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf3c5Q8R2T8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gtf3c5Q8R2T8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gtf3c5Q8R2T8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gtf3c5Q8R2T8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gtf3c5Q8R2T8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Gtf3c5Q8R2T8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Gtf3c5Q8R2T8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gtf3c5Q8R2T8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gtf3c5Q8R2T8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gtf3c5Q8R2T8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gtf3c5Q8R2T8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gtf3c5Q8R2T8 Tgds-204ENSMUST00000228543 1594 ntBASIC20.8■□□□□ 0.92
Gtf3c5Q8R2T8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gtf3c5Q8R2T8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gtf3c5Q8R2T8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Gtf3c5Q8R2T8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gtf3c5Q8R2T8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gtf3c5Q8R2T8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gtf3c5Q8R2T8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.8■□□□□ 0.92
Gtf3c5Q8R2T8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.8■□□□□ 0.92
Gtf3c5Q8R2T8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gtf3c5Q8R2T8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gtf3c5Q8R2T8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gtf3c5Q8R2T8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
Gtf3c5Q8R2T8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Gtf3c5Q8R2T8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Gtf3c5Q8R2T8 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.79■□□□□ 0.92
Gtf3c5Q8R2T8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gtf3c5Q8R2T8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gtf3c5Q8R2T8 Gm10418-201ENSMUST00000100943 576 ntBASIC20.79■□□□□ 0.92
Gtf3c5Q8R2T8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gtf3c5Q8R2T8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.79■□□□□ 0.92
Gtf3c5Q8R2T8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gtf3c5Q8R2T8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gtf3c5Q8R2T8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gtf3c5Q8R2T8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gtf3c5Q8R2T8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gtf3c5Q8R2T8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Gtf3c5Q8R2T8 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gtf3c5Q8R2T8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gtf3c5Q8R2T8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gtf3c5Q8R2T8 Gm5643-201ENSMUST00000117081 966 ntBASIC20.78■□□□□ 0.92
Gtf3c5Q8R2T8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gtf3c5Q8R2T8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gtf3c5Q8R2T8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gtf3c5Q8R2T8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gtf3c5Q8R2T8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gtf3c5Q8R2T8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gtf3c5Q8R2T8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gtf3c5Q8R2T8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.77■□□□□ 0.92
Gtf3c5Q8R2T8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Gtf3c5Q8R2T8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gtf3c5Q8R2T8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gtf3c5Q8R2T8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Gtf3c5Q8R2T8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
Gtf3c5Q8R2T8 Gm10653-202ENSMUST00000139570 835 ntBASIC20.77■□□□□ 0.92
Gtf3c5Q8R2T8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gtf3c5Q8R2T8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gtf3c5Q8R2T8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gtf3c5Q8R2T8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gtf3c5Q8R2T8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf3c5Q8R2T8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf3c5Q8R2T8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf3c5Q8R2T8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf3c5Q8R2T8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf3c5Q8R2T8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.76■□□□□ 0.91
Gtf3c5Q8R2T8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf3c5Q8R2T8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Gtf3c5Q8R2T8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gtf3c5Q8R2T8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gtf3c5Q8R2T8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms