Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Pdlim2Q8R1G6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pdlim2Q8R1G6 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Pdlim2Q8R1G6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pdlim2Q8R1G6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Pdlim2Q8R1G6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.51■□□□□ 0.87
Pdlim2Q8R1G6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdlim2Q8R1G6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdlim2Q8R1G6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdlim2Q8R1G6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Pdlim2Q8R1G6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdlim2Q8R1G6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdlim2Q8R1G6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdlim2Q8R1G6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdlim2Q8R1G6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Pdlim2Q8R1G6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdlim2Q8R1G6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdlim2Q8R1G6 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdlim2Q8R1G6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdlim2Q8R1G6 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdlim2Q8R1G6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdlim2Q8R1G6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pdlim2Q8R1G6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.51■□□□□ 0.87
Pdlim2Q8R1G6 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pdlim2Q8R1G6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Pdlim2Q8R1G6 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.5■□□□□ 0.87
Pdlim2Q8R1G6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdlim2Q8R1G6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pdlim2Q8R1G6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pdlim2Q8R1G6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdlim2Q8R1G6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdlim2Q8R1G6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdlim2Q8R1G6 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pdlim2Q8R1G6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pdlim2Q8R1G6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdlim2Q8R1G6 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdlim2Q8R1G6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdlim2Q8R1G6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdlim2Q8R1G6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdlim2Q8R1G6 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdlim2Q8R1G6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Pdlim2Q8R1G6 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Pdlim2Q8R1G6 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pdlim2Q8R1G6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pdlim2Q8R1G6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pdlim2Q8R1G6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.48■□□□□ 0.87
Pdlim2Q8R1G6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.48■□□□□ 0.87
Pdlim2Q8R1G6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Pdlim2Q8R1G6 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pdlim2Q8R1G6 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC20.48■□□□□ 0.87
Pdlim2Q8R1G6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
Pdlim2Q8R1G6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pdlim2Q8R1G6 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.48■□□□□ 0.87
Pdlim2Q8R1G6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pdlim2Q8R1G6 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Pdlim2Q8R1G6 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Pdlim2Q8R1G6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim2Q8R1G6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim2Q8R1G6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim2Q8R1G6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim2Q8R1G6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim2Q8R1G6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim2Q8R1G6 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim2Q8R1G6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim2Q8R1G6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Pdlim2Q8R1G6 Gm7417-201ENSMUST00000192950 473 ntBASIC20.47■□□□□ 0.87
Pdlim2Q8R1G6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.47■□□□□ 0.87
Pdlim2Q8R1G6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.47■□□□□ 0.87
Pdlim2Q8R1G6 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Pdlim2Q8R1G6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim2Q8R1G6 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim2Q8R1G6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim2Q8R1G6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.47■□□□□ 0.87
Pdlim2Q8R1G6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim2Q8R1G6 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim2Q8R1G6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdlim2Q8R1G6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdlim2Q8R1G6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pdlim2Q8R1G6 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdlim2Q8R1G6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Pdlim2Q8R1G6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdlim2Q8R1G6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdlim2Q8R1G6 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdlim2Q8R1G6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pdlim2Q8R1G6 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdlim2Q8R1G6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdlim2Q8R1G6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdlim2Q8R1G6 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pdlim2Q8R1G6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdlim2Q8R1G6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdlim2Q8R1G6 AC133083.1-201ENSMUST00000221736 2209 ntBASIC20.46■□□□□ 0.87
Pdlim2Q8R1G6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC20.46■□□□□ 0.87
Pdlim2Q8R1G6 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pdlim2Q8R1G6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Pdlim2Q8R1G6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim2Q8R1G6 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim2Q8R1G6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim2Q8R1G6 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC20.45■□□□□ 0.86
Pdlim2Q8R1G6 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim2Q8R1G6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms