Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shtn1Q8K2Q9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Shtn1Q8K2Q9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Shtn1Q8K2Q9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Shtn1Q8K2Q9 Gm9694-201ENSMUST00000193347 1189 ntBASIC21.01■□□□□ 0.95
Shtn1Q8K2Q9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shtn1Q8K2Q9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shtn1Q8K2Q9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shtn1Q8K2Q9 Gm15853-202ENSMUST00000195518 2041 ntBASIC21■□□□□ 0.95
Shtn1Q8K2Q9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shtn1Q8K2Q9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shtn1Q8K2Q9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shtn1Q8K2Q9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shtn1Q8K2Q9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Shtn1Q8K2Q9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Shtn1Q8K2Q9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shtn1Q8K2Q9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC21■□□□□ 0.95
Shtn1Q8K2Q9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shtn1Q8K2Q9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Shtn1Q8K2Q9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21■□□□□ 0.95
Shtn1Q8K2Q9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shtn1Q8K2Q9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shtn1Q8K2Q9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shtn1Q8K2Q9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Shtn1Q8K2Q9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Shtn1Q8K2Q9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.99■□□□□ 0.95
Shtn1Q8K2Q9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.99■□□□□ 0.95
Shtn1Q8K2Q9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.99■□□□□ 0.95
Shtn1Q8K2Q9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.99■□□□□ 0.95
Shtn1Q8K2Q9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.99■□□□□ 0.95
Shtn1Q8K2Q9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shtn1Q8K2Q9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shtn1Q8K2Q9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shtn1Q8K2Q9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Shtn1Q8K2Q9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shtn1Q8K2Q9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shtn1Q8K2Q9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shtn1Q8K2Q9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shtn1Q8K2Q9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Shtn1Q8K2Q9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Shtn1Q8K2Q9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shtn1Q8K2Q9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shtn1Q8K2Q9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shtn1Q8K2Q9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Shtn1Q8K2Q9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.98■□□□□ 0.95
Shtn1Q8K2Q9 Gm28033-201ENSMUST00000184224 96 ntBASIC20.98■□□□□ 0.95
Shtn1Q8K2Q9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.98■□□□□ 0.95
Shtn1Q8K2Q9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.98■□□□□ 0.95
Shtn1Q8K2Q9 AC133598.3-202ENSMUST00000224219 531 ntBASIC20.98■□□□□ 0.95
Shtn1Q8K2Q9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shtn1Q8K2Q9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Shtn1Q8K2Q9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Shtn1Q8K2Q9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shtn1Q8K2Q9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shtn1Q8K2Q9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shtn1Q8K2Q9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Shtn1Q8K2Q9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Shtn1Q8K2Q9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.97■□□□□ 0.95
Shtn1Q8K2Q9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.97■□□□□ 0.95
Shtn1Q8K2Q9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.97■□□□□ 0.95
Shtn1Q8K2Q9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Shtn1Q8K2Q9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
Shtn1Q8K2Q9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shtn1Q8K2Q9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shtn1Q8K2Q9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Shtn1Q8K2Q9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shtn1Q8K2Q9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Shtn1Q8K2Q9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Shtn1Q8K2Q9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Shtn1Q8K2Q9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shtn1Q8K2Q9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shtn1Q8K2Q9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.96■□□□□ 0.95
Shtn1Q8K2Q9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Shtn1Q8K2Q9 Gm27704-201ENSMUST00000185094 107 ntBASIC20.96■□□□□ 0.95
Shtn1Q8K2Q9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shtn1Q8K2Q9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Shtn1Q8K2Q9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Shtn1Q8K2Q9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shtn1Q8K2Q9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Shtn1Q8K2Q9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Shtn1Q8K2Q9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Shtn1Q8K2Q9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shtn1Q8K2Q9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Shtn1Q8K2Q9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Shtn1Q8K2Q9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Shtn1Q8K2Q9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shtn1Q8K2Q9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shtn1Q8K2Q9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shtn1Q8K2Q9 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.94■□□□□ 0.94
Shtn1Q8K2Q9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Shtn1Q8K2Q9 Gm25016-201ENSMUST00000158399 131 ntBASIC20.94■□□□□ 0.94
Shtn1Q8K2Q9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shtn1Q8K2Q9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shtn1Q8K2Q9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Shtn1Q8K2Q9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Shtn1Q8K2Q9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shtn1Q8K2Q9 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.93■□□□□ 0.94
Shtn1Q8K2Q9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shtn1Q8K2Q9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.93■□□□□ 0.94
Shtn1Q8K2Q9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms