Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cchcr1Q8K2I2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC21.08■□□□□ 0.96
Cchcr1Q8K2I2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cchcr1Q8K2I2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cchcr1Q8K2I2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cchcr1Q8K2I2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cchcr1Q8K2I2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cchcr1Q8K2I2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cchcr1Q8K2I2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cchcr1Q8K2I2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cchcr1Q8K2I2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cchcr1Q8K2I2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cchcr1Q8K2I2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cchcr1Q8K2I2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cchcr1Q8K2I2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.07■□□□□ 0.96
Cchcr1Q8K2I2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cchcr1Q8K2I2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cchcr1Q8K2I2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cchcr1Q8K2I2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cchcr1Q8K2I2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cchcr1Q8K2I2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cchcr1Q8K2I2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cchcr1Q8K2I2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cchcr1Q8K2I2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cchcr1Q8K2I2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Cchcr1Q8K2I2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cchcr1Q8K2I2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cchcr1Q8K2I2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cchcr1Q8K2I2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Cchcr1Q8K2I2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Cchcr1Q8K2I2 Gm2399-201ENSMUST00000104944 225 ntBASIC21.06■□□□□ 0.96
Cchcr1Q8K2I2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.06■□□□□ 0.96
Cchcr1Q8K2I2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.06■□□□□ 0.96
Cchcr1Q8K2I2 Gm38285-201ENSMUST00000192928 922 ntBASIC21.06■□□□□ 0.96
Cchcr1Q8K2I2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cchcr1Q8K2I2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cchcr1Q8K2I2 Gm9954-202ENSMUST00000198686 4725 ntBASIC21.06■□□□□ 0.96
Cchcr1Q8K2I2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cchcr1Q8K2I2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC21.06■□□□□ 0.96
Cchcr1Q8K2I2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cchcr1Q8K2I2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cchcr1Q8K2I2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cchcr1Q8K2I2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cchcr1Q8K2I2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cchcr1Q8K2I2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.05■□□□□ 0.96
Cchcr1Q8K2I2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cchcr1Q8K2I2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cchcr1Q8K2I2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cchcr1Q8K2I2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cchcr1Q8K2I2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cchcr1Q8K2I2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cchcr1Q8K2I2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cchcr1Q8K2I2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cchcr1Q8K2I2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cchcr1Q8K2I2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cchcr1Q8K2I2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cchcr1Q8K2I2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC21.04■□□□□ 0.96
Cchcr1Q8K2I2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cchcr1Q8K2I2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cchcr1Q8K2I2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cchcr1Q8K2I2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.04■□□□□ 0.96
Cchcr1Q8K2I2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cchcr1Q8K2I2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.04■□□□□ 0.96
Cchcr1Q8K2I2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.04■□□□□ 0.96
Cchcr1Q8K2I2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cchcr1Q8K2I2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cchcr1Q8K2I2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cchcr1Q8K2I2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cchcr1Q8K2I2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cchcr1Q8K2I2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cchcr1Q8K2I2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Cchcr1Q8K2I2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Cchcr1Q8K2I2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Cchcr1Q8K2I2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cchcr1Q8K2I2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.03■□□□□ 0.96
Cchcr1Q8K2I2 Gm44549-201ENSMUST00000208351 577 ntBASIC21.03■□□□□ 0.96
Cchcr1Q8K2I2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cchcr1Q8K2I2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cchcr1Q8K2I2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.03■□□□□ 0.96
Cchcr1Q8K2I2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cchcr1Q8K2I2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Cchcr1Q8K2I2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cchcr1Q8K2I2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Cchcr1Q8K2I2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cchcr1Q8K2I2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cchcr1Q8K2I2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cchcr1Q8K2I2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Cchcr1Q8K2I2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cchcr1Q8K2I2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.02■□□□□ 0.96
Cchcr1Q8K2I2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cchcr1Q8K2I2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cchcr1Q8K2I2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cchcr1Q8K2I2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cchcr1Q8K2I2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Cchcr1Q8K2I2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cchcr1Q8K2I2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.02■□□□□ 0.95
Cchcr1Q8K2I2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Cchcr1Q8K2I2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cchcr1Q8K2I2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cchcr1Q8K2I2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms