Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgcs1Q8JZK9 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.01■□□□□ 0.31
Hmgcs1Q8JZK9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcs1Q8JZK9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcs1Q8JZK9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcs1Q8JZK9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcs1Q8JZK9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17■□□□□ 0.31
Hmgcs1Q8JZK9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcs1Q8JZK9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcs1Q8JZK9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Hmgcs1Q8JZK9 Gm7291-201ENSMUST00000199147 382 ntBASIC17■□□□□ 0.31
Hmgcs1Q8JZK9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcs1Q8JZK9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcs1Q8JZK9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcs1Q8JZK9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcs1Q8JZK9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcs1Q8JZK9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcs1Q8JZK9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcs1Q8JZK9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcs1Q8JZK9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcs1Q8JZK9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcs1Q8JZK9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Hmgcs1Q8JZK9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcs1Q8JZK9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcs1Q8JZK9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcs1Q8JZK9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.99■□□□□ 0.31
Hmgcs1Q8JZK9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcs1Q8JZK9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcs1Q8JZK9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Hmgcs1Q8JZK9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.99■□□□□ 0.31
Hmgcs1Q8JZK9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcs1Q8JZK9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.99■□□□□ 0.31
Hmgcs1Q8JZK9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcs1Q8JZK9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.99■□□□□ 0.31
Hmgcs1Q8JZK9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcs1Q8JZK9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcs1Q8JZK9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcs1Q8JZK9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.99■□□□□ 0.31
Hmgcs1Q8JZK9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Hmgcs1Q8JZK9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcs1Q8JZK9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcs1Q8JZK9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcs1Q8JZK9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcs1Q8JZK9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcs1Q8JZK9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Hmgcs1Q8JZK9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcs1Q8JZK9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcs1Q8JZK9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcs1Q8JZK9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcs1Q8JZK9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcs1Q8JZK9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Hmgcs1Q8JZK9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Hmgcs1Q8JZK9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcs1Q8JZK9 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.98■□□□□ 0.31
Hmgcs1Q8JZK9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcs1Q8JZK9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Hmgcs1Q8JZK9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcs1Q8JZK9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Hmgcs1Q8JZK9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcs1Q8JZK9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcs1Q8JZK9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcs1Q8JZK9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcs1Q8JZK9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgcs1Q8JZK9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgcs1Q8JZK9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgcs1Q8JZK9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgcs1Q8JZK9 Idnk-204ENSMUST00000226010 1898 ntBASIC16.97■□□□□ 0.31
Hmgcs1Q8JZK9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgcs1Q8JZK9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgcs1Q8JZK9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgcs1Q8JZK9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgcs1Q8JZK9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.97■□□□□ 0.31
Hmgcs1Q8JZK9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Hmgcs1Q8JZK9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgcs1Q8JZK9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgcs1Q8JZK9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgcs1Q8JZK9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.97■□□□□ 0.31
Hmgcs1Q8JZK9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgcs1Q8JZK9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgcs1Q8JZK9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgcs1Q8JZK9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.96■□□□□ 0.31
Hmgcs1Q8JZK9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.96■□□□□ 0.31
Hmgcs1Q8JZK9 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.96■□□□□ 0.31
Hmgcs1Q8JZK9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.96■□□□□ 0.31
Hmgcs1Q8JZK9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgcs1Q8JZK9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hmgcs1Q8JZK9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hmgcs1Q8JZK9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hmgcs1Q8JZK9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Hmgcs1Q8JZK9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hmgcs1Q8JZK9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Hmgcs1Q8JZK9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Hmgcs1Q8JZK9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Hmgcs1Q8JZK9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgcs1Q8JZK9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgcs1Q8JZK9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgcs1Q8JZK9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgcs1Q8JZK9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgcs1Q8JZK9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgcs1Q8JZK9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms