Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rbm28Q8CGC6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rbm28Q8CGC6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rbm28Q8CGC6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Rbm28Q8CGC6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rbm28Q8CGC6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Rbm28Q8CGC6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Rbm28Q8CGC6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rbm28Q8CGC6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.06■□□□□ 0.96
Rbm28Q8CGC6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rbm28Q8CGC6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rbm28Q8CGC6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rbm28Q8CGC6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.06■□□□□ 0.96
Rbm28Q8CGC6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rbm28Q8CGC6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.06■□□□□ 0.96
Rbm28Q8CGC6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rbm28Q8CGC6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
Rbm28Q8CGC6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Rbm28Q8CGC6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rbm28Q8CGC6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rbm28Q8CGC6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rbm28Q8CGC6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rbm28Q8CGC6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rbm28Q8CGC6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rbm28Q8CGC6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.05■□□□□ 0.96
Rbm28Q8CGC6 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.05■□□□□ 0.96
Rbm28Q8CGC6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rbm28Q8CGC6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rbm28Q8CGC6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rbm28Q8CGC6 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rbm28Q8CGC6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rbm28Q8CGC6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rbm28Q8CGC6 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rbm28Q8CGC6 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rbm28Q8CGC6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.05■□□□□ 0.96
Rbm28Q8CGC6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.05■□□□□ 0.96
Rbm28Q8CGC6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rbm28Q8CGC6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Rbm28Q8CGC6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rbm28Q8CGC6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Rbm28Q8CGC6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rbm28Q8CGC6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rbm28Q8CGC6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rbm28Q8CGC6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rbm28Q8CGC6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
Rbm28Q8CGC6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rbm28Q8CGC6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rbm28Q8CGC6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rbm28Q8CGC6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
Rbm28Q8CGC6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rbm28Q8CGC6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rbm28Q8CGC6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Rbm28Q8CGC6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.03■□□□□ 0.96
Rbm28Q8CGC6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rbm28Q8CGC6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC21.03■□□□□ 0.96
Rbm28Q8CGC6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Rbm28Q8CGC6 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rbm28Q8CGC6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rbm28Q8CGC6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rbm28Q8CGC6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rbm28Q8CGC6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rbm28Q8CGC6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.02■□□□□ 0.96
Rbm28Q8CGC6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.02■□□□□ 0.96
Rbm28Q8CGC6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.02■□□□□ 0.96
Rbm28Q8CGC6 Gm42545-201ENSMUST00000202755 922 ntBASIC21.02■□□□□ 0.96
Rbm28Q8CGC6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rbm28Q8CGC6 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rbm28Q8CGC6 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rbm28Q8CGC6 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.01■□□□□ 0.95
Rbm28Q8CGC6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rbm28Q8CGC6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rbm28Q8CGC6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rbm28Q8CGC6 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.01■□□□□ 0.95
Rbm28Q8CGC6 Gm10461-201ENSMUST00000202073 4786 ntBASIC21.01■□□□□ 0.95
Rbm28Q8CGC6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rbm28Q8CGC6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.01■□□□□ 0.95
Rbm28Q8CGC6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rbm28Q8CGC6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rbm28Q8CGC6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rbm28Q8CGC6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Rbm28Q8CGC6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rbm28Q8CGC6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rbm28Q8CGC6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rbm28Q8CGC6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rbm28Q8CGC6 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rbm28Q8CGC6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rbm28Q8CGC6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Rbm28Q8CGC6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rbm28Q8CGC6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rbm28Q8CGC6 Mir6349-201ENSMUST00000184059 97 ntBASIC21■□□□□ 0.95
Rbm28Q8CGC6 Gm29994-201ENSMUST00000195495 1193 ntBASIC21■□□□□ 0.95
Rbm28Q8CGC6 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rbm28Q8CGC6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rbm28Q8CGC6 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21■□□□□ 0.95
Rbm28Q8CGC6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rbm28Q8CGC6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rbm28Q8CGC6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Rbm28Q8CGC6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rbm28Q8CGC6 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rbm28Q8CGC6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms